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BaseInfo

ncRNA ID	novel_osa_miR1733
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:31538598-31538668 [-]
Reference genome	IRGSP-1.0
Source	SRR1743002
Length	19
Mature sequence(if miRNA)	53 - CACGGAAGCAAGAAUUGUU - 71
Stem-loop(if miRNA)	--C     -A       UU      --CAAA  -        ACGGA  GCAAGAA  GUUCAU      AC CCGAU    |||||  |||||||  ||||||      || ||||C    UGUCU  CGUUCUU  UAGGUG      UG GGUUU GUU     AG       --      CCCCGG  C
Stem-loop sequence	CACGGAAGCAAGAAUUGUUCAUCAAAACCCGAUCUUUGGCGUGGCCCCGUGGAUUUCUUGCGAUCUGUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK058591.1	ncRNA:19   UUGUUAAGAACGAAGGCAC   1   ||=||||||||||||||*| targets:500   AAUAAUUCUUGCUUCCGAG   518 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-017-G08, full insert sequence	NA	coding protein	psRNATarget
AK102087.1	ncRNA:19   UUGUUAAGAACGAAGGCAC   1   ||=||||||||||||||*| targets:1235   AAUAAUUCUUGCUUCCGAG   1253 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033082N17, full insert sequence	NA	coding protein	psRNATarget
XM_015758904.1	ncRNA:19   UUGUUAAGAACGAAGGCAC   1   ||=||||||||||||||*| targets:2224   AAUAAUUCUUGCUUCCGAG   2242 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group myosin-1 (LOC4348961), mRNA	myosin-1(LOC4348961)	coding protein	psRNATarget
AK107912.1	ncRNA:19   UUGUUAAGAACGAAGGCAC   1   ||*|||||||||||||*|| targets:559   AAAAAUUCUUGCUUCCAUG   577 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-134-G07, full insert sequence	NA	coding protein	psRNATarget