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BaseInfo

ncRNA ID	novel_osa_miR1725
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:41025942-41026041 [+]
Reference genome	IRGSP-1.0
Source	SRR1743002
Length	24
Mature sequence(if miRNA)	77 - AUGAAUAUAGAAAAUGUUAGAAUG - 100
Stem-loop(if miRNA)	--             CAC                         A  AUAU   UUCUAGCAUUUUC   AUUCAUAUAGAUGCUAAUGAAUUUA AC    A   |||||||||||||   ||||||||||||||||||||||||| ||   AAGAUUGUAAAAG   UAAGUAUAUUUACGAUUACUUAGAU UG    U GU             AUA                         A  CGUA
Stem-loop sequence	UUCUAGCAUUUUCCACAUUCAUAUAGAUGCUAAUGAAUUUAAACAUAUAUAUGCGUAUAGAUUCAUUAGCAUUUAUAUGAAUAUAGAAAAUGUUAGAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015775040.1	ncRNA:24   GUAAGAUUGUAAAAGAUAUAAGUA   1   |||||||||||||||||*|||||| targets:1210   CAUUCUAACAUUUUCUACAUUCAU   1233 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group senescence-specific cysteine protease SAG39-like (LOC107280424), mRNA	senescence-specific cysteine protease SAG39-like(LOC107280424)	coding protein	psRNATarget
XM_015777143.1	ncRNA:24   GUAAGAUUGUAAAAGAUAUAAGUA   1   |||||||*|||||||||||||=|| targets:1908   CAUUCUAUCAUUUUCUAUAUUUAU   1931 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group lecithin-cholesterol acyltransferase-like 1 (LOC4333995), mRNA	lecithin-cholesterol acyltransferase-like 1(LOC4333995)	coding protein	psRNATarget
AK071679.1	ncRNA:24   GUAAGAUUGUAAAAGAUAUAAGUA   1   |||||||*|||||||||||||=|| targets:1792   CAUUCUAUCAUUUUCUAUAUUUAU   1815 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023108I08, full insert sequence	NA	coding protein	psRNATarget
AK241705.1	ncRNA:24   GUAAGAUUGUAAAAGAUAUAAGUA   1   ||||=||=|||||*|||||||||| targets:3983   CAUUUUAGCAUUUCCUAUAUUCAU   4006 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065196L09, full insert sequence	NA	coding protein	psRNATarget
XM_015763160.1	ncRNA:24   GUAAGAUUGUAAAAGAUAUAAGUA   1   =||||||=||||||||||||*||| targets:1111   UAUUCUAGCAUUUUCUAUAUCCAU   1134 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group acidic endochitinase (LOC4325066), mRNA	acidic endochitinase(LOC4325066)	coding protein	psRNATarget
AK111415.1	ncRNA:24   GUAAGAUUGUAAAAGAUAUAAGUA   1   =||||||=||||||||||||*||| targets:1106   UAUUCUAGCAUUUUCUAUAUCCAU   1129 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-182-G02, full insert sequence	NA	coding protein	psRNATarget
XM_015766384.1	ncRNA:24   GUAAGAU-UGUAAAAGAUAUAAGUA   1   =|*||||-||||||||||||||||* targets:1338   UACUCUAGACAUUUUCUAUAUUCAA   1362 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group probable arabinosyltransferase ARAD1 (LOC4327360), transcript variant X1, mRNA	probable arabinosyltransferase ARAD1(LOC4327360)	coding protein	psRNATarget
AK288096.1	ncRNA:24   GUAAGAU-UGUAAAAGAUAUAAGUA   1   =|*||||-||||||||||||||||* targets:1429   UACUCUAGACAUUUUCUAUAUUCAA   1453 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J075192C12, full insert sequence	NA	coding protein	psRNATarget