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BaseInfo

ncRNA ID novel_osa_miR1721
Species Oryza sativa
Class miRNA
Genome position Chr10:10764466-10764525 [-]
Reference genome IRGSP-1.0
Source SRR1743002;SRR2857736;SRR3123646;SRR1738228
Length 24
Mature sequence(if miRNA) 1 - AUAAACUAGAUUGUUAUAAUCUGU - 24
Stem-loop(if miRNA) --       U         A    UG   UA
  AGAUUAU AUAAUCUAG UUAU  AGU  G
  ||||||| ||||||||| ||||  |||
  UCUAAUA UGUUAGAUC AAUA  UCA  A
UG       U         A    --   UU
Stem-loop sequence AGAUUAUUAUAAUCUAGAUUAUUGAGUUAGAUUACUAUAAACUAGAUUGUUAUAAUCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015766281.1
ncRNA:24   UGUCUAAUAUUGUUAGAUCAAAUA   1
  |||||||||||||||||||*||||
targets:1523   ACAGAUUAUAACAAUCUAGAUUAU   1546

1.5 PREDICTED: Oryza sativa Japonica Group putative D-cysteine desulfhydrase 2, mitochondrial (LOC9270375), transcript variant X2, mRNA putative D-cysteine desulfhydrase 2, mitochondrial(LOC9270375) coding protein psRNATarget
AK100384.1
ncRNA:24   UGUCUAAUAUUGUUAGAUCAAAUA   1
  |||*|||||||||||||||*||||
targets:1200   ACAUAUUAUAACAAUCUAGCUUAU   1223

1.5 Oryza sativa Japonica Group cDNA clone:J023085H13, full insert sequence NA coding protein psRNATarget