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BaseInfo

ncRNA ID	novel_osa_miR1719
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:10288675-10288741 [-]
Reference genome	IRGSP-1.0
Source	SRR1743002;SRR2040402;SRR2857734;SRR2857735
Length	24
Mature sequence(if miRNA)	1 - AUGUUUUUGUCGGUACUUUGGUAC - 24
Stem-loop(if miRNA)	--   UU    A  C           A U   A   ACU  GGUA UG UGAAGAUAUCU C GUU U   |||  |||| || ||||||||||| | ||| A   UGG  UCAU GC GUUUUUGUAGA G UAA A CA   UU    G  U           A U   A
Stem-loop sequence	ACUUUGGUAAUGCUGAAGAUAUCUACUGUUAUAAAAAUUGAAGAUGUUUUUGUCGGUACUUUGGUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK066602.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   |||||=||||||||=||||||||| targets:1094   GUACCGAAGUACCGGCAAAAACAU   1117 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013071E20, full insert sequence	NA	coding protein	psRNATarget
AK100425.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   |||||=||||||||=||||||||| targets:1094   GUACCGAAGUACCGGCAAAAACAU   1117 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023088C01, full insert sequence	NA	coding protein	psRNATarget
CT828852.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   ||||||||*|||||=||||||||| targets:1309   GUACCAAAAUACCGGCAAAAACAU   1332 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN119D09, full insert sequence	NA	coding protein	psRNATarget
XM_015795713.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   ||||||||*|||||=||||||||| targets:73   GUACCAAAAUACCGGCAAAAACAU   96 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC9268330), transcript variant X4, mRNA	disease resistance protein RPM1(LOC9268330)	coding protein	psRNATarget
XM_015795712.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   ||||||||*|||||=||||||||| targets:73   GUACCAAAAUACCGGCAAAAACAU   96 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC9268330), transcript variant X3, mRNA	disease resistance protein RPM1(LOC9268330)	coding protein	psRNATarget
XM_015795710.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   ||||||||*|||||=||||||||| targets:73   GUACCAAAAUACCGGCAAAAACAU   96 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC9268330), transcript variant X1, mRNA	disease resistance protein RPM1(LOC9268330)	coding protein	psRNATarget
XM_015795715.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   ||||||||*|||||=||||||||| targets:73   GUACCAAAAUACCGGCAAAAACAU   96 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC9268330), transcript variant X6, mRNA	disease resistance protein RPM1(LOC9268330)	coding protein	psRNATarget
AK288907.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   ||||||||*|||||=||||||||| targets:4073   GUACCAAAAUACCGGCAAAAACAU   4096 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090081C13, full insert sequence	NA	coding protein	psRNATarget
CT834818.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   *|||||||*|||||=||||||||| targets:880   CUACCAAAAUACCGGCAAAAACAU   903 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA228H20, full insert sequence	NA	coding protein	psRNATarget
AK072943.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   *||=|||||||||*|||||||||| targets:1570   AUAUCAAAGUACCAACAAAAACAU   1593 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023148N05, full insert sequence	NA	coding protein	psRNATarget
AK288587.1	ncRNA:24   CAUGGUUUCAUGGCUGUUUUUGUA   1   |*||||||*||||||||||||||| targets:2623   GAACCAAAAUACCGACAAAAACAU   2646 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090050A10, full insert sequence	NA	coding protein	psRNATarget