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BaseInfo

ncRNA ID	novel_osa_miR1711
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:2884216-2884322 [+]
Reference genome	IRGSP-1.0
Source	SRR1743002;SRR2040400;SRR2040402;SRR2040408
Length	24
Mature sequence(if miRNA)	1 - AAGAGAUUUUAGGUGGAUAUGACA - 24
Stem-loop(if miRNA)	--              G   A            C      U   C      AA   AAGAGAUUUUAGGU GAU UGACAUAUCUUA UACAAU AAU UGGAUA  G   |||||||||||||| ||| |||||||||||| |||||| ||| ||||||  A   UUCUCUAAAAUCCA CUA ACUGUGUAGGAU AUGUUA UUA ACUUGU  A UA              A   C            C      C   A      AU
Stem-loop sequence	AAGAGAUUUUAGGUGGAUAUGACAUAUCUUACUACAAUUAAUCUGGAUAAAGAAUAUGUUCAAAUUCAUUGUACUAGGAUGUGUCACAUCAACCUAAAAUCUCUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK069433.1	ncRNA:24   ACA--GUAUAGGUGGAUUUUAGAGAA   1   |||--||||||||||||||||||||| targets:366   UGUAUCAUAUCCACCUAAAAUCUCUU   391 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J023025M19, full insert sequence	NA	coding protein	psRNATarget
AK288272.1	ncRNA:24   ACAGUAUAGGUGGAUUUUAGAGAA   1   ||||||||*||||||||||*|||| targets:1129   UGUCAUAUGCACCUAAAAUAUCUU   1152 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090017B03, full insert sequence	NA	coding protein	psRNATarget
XM_015761223.1	ncRNA:24   ACA--GUAUAGGUGGAUUUUAGAGAA   1   |||--|||||*||||||||||=|||| targets:936   UGUGACAUAUGCACCUAAAAUUUCUU   961 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350921 (LOC4350921), mRNA	uncharacterized LOC4350921(LOC4350921)	coding protein	psRNATarget
AK107101.1	ncRNA:24   ACA--GUAUAGGUGGAUUUUAGAGAA   1   |||--|||||*||||||||||=|||| targets:942   UGUGACAUAUGCACCUAAAAUUUCUU   967 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-122-A04, full insert sequence	NA	coding protein	psRNATarget