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BaseInfo

ncRNA ID	novel_osa_miR1703
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:1430205-1430279 [+]
Reference genome	IRGSP-1.0
Source	SRR1743002
Length	24
Mature sequence(if miRNA)	1 - AUUAGCUAUAGAUGUUUUGGAGCC - 24
Stem-loop(if miRNA)	--AUU       G - G         -----       UG      AGCUAUA A U UUUUGGAGC     CAAUAGU  G      ||||||| | | |||||||||     |||||||  C      UCGAUGU U A AAAAUCUCG     GUUAUCA  U ACUAU       G C G         UUCCA       UA
Stem-loop sequence	AUUAGCUAUAGAUGUUUUGGAGCCAAUAGUUGGCUAUACUAUUGACCUUGCUCUAAAAGACUGUGUAGCUUAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK241622.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   |||||||||||||=|||||||||| targets:554   GGCUCCAAAACAUUUAUAGCUAAU   577 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J065186L24, full insert sequence	NA	coding protein	psRNATarget
AK100013.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   ||||||||||||||||||||*||| targets:627   GGCUCCAAAACAUCUAUAGCCAAU   650 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013142C13, full insert sequence	NA	coding protein	psRNATarget
AK288660.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   *||||||||*|||||||||||||| targets:1738   AGCUCCAAAUCAUCUAUAGCUAAU   1761 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090057N05, full insert sequence	NA	coding protein	psRNATarget
AK288858.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   *|||||||*||||||||||||||| targets:4110   AGCUCCAAUACAUCUAUAGCUAAU   4133 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090076F15, full insert sequence	NA	coding protein	psRNATarget
XM_015763266.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   *|||||||*||||||||||||||| targets:4104   AGCUCCAAUACAUCUAUAGCUAAU   4127 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable galacturonosyltransferase 7 (LOC4351364), transcript variant X2, mRNA	probable galacturonosyltransferase 7(LOC4351364)	coding protein	psRNATarget
XM_015763265.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   *|||||||*||||||||||||||| targets:4104   AGCUCCAAUACAUCUAUAGCUAAU   4127 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable galacturonosyltransferase 7 (LOC4351364), transcript variant X1, mRNA	probable galacturonosyltransferase 7(LOC4351364)	coding protein	psRNATarget
AK071876.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   ||=|=||||*|||||||||||||| targets:1640   GGUUUCAAAUCAUCUAUAGCUAAU   1663 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013040F16, full insert sequence	NA	coding protein	psRNATarget
AK071612.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   *||||||||*|||||||||||||* targets:889   AGCUCCAAAUCAUCUAUAGCUAAA   912 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023104L09, full insert sequence	NA	coding protein	psRNATarget
AK288392.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   *||||||||*||||||||||*||| targets:2467   AGCUCCAAAUCAUCUAUAGCCAAU   2490 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090027K17, full insert sequence	NA	coding protein	psRNATarget
CT833980.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   **|||||||*||||||||||*||| targets:591   UACUCCAAAUCAUCUAUAGCCAAU   614 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN073L01, full insert sequence	NA	coding protein	psRNATarget
AK241681.1	ncRNA:24   CCGAGGUUUUGUAGAUAUCGAUUA   1   ****|||||*|||||||||||||| targets:1719   CCAACCAAAUCAUCUAUAGCUAAU   1742 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J065193N01, full insert sequence	NA	coding protein	psRNATarget