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BaseInfo

ncRNA ID	novel_osa_miR1702
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:694681-694736 [+]
Reference genome	IRGSP-1.0
Source	SRR1743002;SRR1849767;SRR5049790;SRR1738210
Length	24
Mature sequence(if miRNA)	1 - AAAAACCGGGACUAAAAAUGAUCU - 24
Stem-loop(if miRNA)	--AAA                  U   U      AACCGGGACUAAAAAUGA CUU A      |||||||||||||||||| |||      UUGGCCCUGAUUUUUACU GAA G CUUAG                  U   C
Stem-loop sequence	AAAAACCGGGACUAAAAAUGAUCUUUAGCAAGUUCAUUUUUAGUCCCGGUUGAUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288405.1	ncRNA:24   UCUAGUAAAAAUCAGGGCCAAAAA   1   ||||||||||||||||=||||||* targets:2426   AGAUCAUUUUUAGUCCUGGUUUUA   2449 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:24   UCUAGUAAAAAUCAGGGCCAAAAA   1   ||||**|||||||||||||||||| targets:2458   AGAUGCUUUUUAGUCCCGGUUUUU   2481 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:24   UCUAGUAAAAAUCAGGGCCAAAAA   1   ||||-|||||||||||=||||||| targets:315   AGAU-AUUUUUAGUCCUGGUUUUU   337 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:24   UCUAGUAAAAAUCAGGGCCAAAAA   1   |||||||*|||||*|||||||||| targets:85   AGAUCAUCUUUAGCCCCGGUUUUU   108 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK288598.1	ncRNA:24   UCUAGUAAAAAUCAGGGCCAAAAA   1   |||||||*|||||*|||||||||| targets:1096   AGAUCAUCUUUAGCCCCGGUUUUU   1119 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090051P05, full insert sequence	NA	coding protein	psRNATarget
AK288496.1	ncRNA:24   UCUAGUAAAAAUCAGGGCCAAAAA   1   |*|||*|||||||||||||||||| targets:719   AAAUCUUUUUUAGUCCCGGUUUUU   742 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090040O05, full insert sequence	NA	coding protein	psRNATarget
AK288859.1	ncRNA:24   UCUAGUAAAAAUCAGGGCCAAAAA   1   ||||-||*|||||||||||||*|| targets:2235   AGAU-AUCUUUAGUCCCGGUUGUU   2257 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090076J15, full insert sequence	NA	coding protein	psRNATarget
XM_015755256.1	ncRNA:24   UCUAGUAAAAAUCAGGGCCAAAAA   1   |*||*=|||||||||*|||||||| targets:184   AAAUGGUUUUUAGUCACGGUUUUU   207 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346665 (LOC4346665), transcript variant X2, mRNA	uncharacterized LOC4346665(LOC4346665)	coding protein	psRNATarget