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BaseInfo

ncRNA ID	novel_osa_miR1699
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:32865939-32865993 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556011;SRR1556014;SRR4407779
Length	24
Mature sequence(if miRNA)	32 - GUCACAUUAGAUAUACGGAUACAC - 55
Stem-loop(if miRNA)	GUCAC        U   ---     ACA      AUUAGAUA ACG   GAUAC   U      |||||||| |||   |||||   U      UAAUCUGU UGC   CUAUG   U AACAA        -   AAA     AAG
Stem-loop sequence	GUCACAUUAGAUAUACGGAUACACAUUUGAAGUAUCAAACGUUGUCUAAUAACAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288682.1	ncRNA:24   CACAUAGGCAUAUAGAUUACACUG   1   ||||||||||||||||=||||||= targets:511   GUGUAUCCGUAUAUCUGAUGUGAU   534 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090059I11, full insert sequence	NA	coding protein	psRNATarget
XM_015790317.1	ncRNA:24   CACAUAGGCAUAUAGAUUACACUG   1   ||||=||||||||||*|||||||* targets:31   GUGUGUCCGUAUAUCCAAUGUGAG   54 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group AAA-ATPase ASD, mitochondrial (LOC4342631), mRNA	AAA-ATPase ASD, mitochondrial(LOC4342631)	coding protein	psRNATarget
AK119775.1	ncRNA:24   CACAUAGGCAUAUAGAUUACACUG   1   |*|||||||||||||*|||||||| targets:916   GCGUAUCCGUAUAUCCAAUGUGAC   939 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-172-G07, full insert sequence	NA	coding protein	psRNATarget
XM_015775745.1	ncRNA:24   CACAUAGGCAUAUAGAUUACACUG   1   *|||*||=||||||||=||||||| targets:430   AUGUCUCUGUAUAUCUGAUGUGAC   453 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group transcription factor BHLH148 (LOC4334060), mRNA	transcription factor BHLH148(LOC4334060)	coding protein	psRNATarget
AK243163.1	ncRNA:24   CACAUAGGCAUAUAGAUUACACUG   1   *|||*||=||||||||=||||||| targets:374   AUGUCUCUGUAUAUCUGAUGUGAC   397 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100034L01, full insert sequence	NA	coding protein	psRNATarget