ncRNA ID | novel_osa_miR1697 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:9322488-9322598 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1743002;SRR2857732 |
Length | 24 |
Mature sequence(if miRNA) | 88 - CGACAAAGUGAUAGUAAUAUUGUU - 111 |
Stem-loop(if miRNA) |
--C  C                      C   A      --      A    -   U    GA AAAGUGAUAGUAAUAUUGUUCA AAA UUUACA  UGUCUC UAUA UUU U    || |||||||||||||||||||||| ||| ||||||  |||||| |||| |||    CU UUUCACUAUCAUUGUAACAAGU UUU AAAUGU  ACAGAG AUAU AAA A AGA  A                      A   C      AU      A    C   U |
Stem-loop sequence | CGACAAAGUGAUAGUAAUAUUGUUCACAAAAUUUACAUGUCUCAUAUAUUUUUAUAAACUAUAAGAGACAUAUGUAAACUUUAUGAACAAUGUUACUAUCACUUUAUCAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT831299.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA205E03, full insert sequence | NA | coding protein | psRNATarget |