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BaseInfo

ncRNA ID novel_osa_miR1697
Species Oryza sativa
Class miRNA
Genome position Chr11:9322488-9322598 [-]
Reference genome IRGSP-1.0
Source SRR1743002;SRR2857732
Length 24
Mature sequence(if miRNA) 88 - CGACAAAGUGAUAGUAAUAUUGUU - 111
Stem-loop(if miRNA) --C  C                      C   A      --      A    -   U
   GA AAAGUGAUAGUAAUAUUGUUCA AAA UUUACA  UGUCUC UAUA UUU U
   || |||||||||||||||||||||| ||| ||||||  |||||| |||| |||
   CU UUUCACUAUCAUUGUAACAAGU UUU AAAUGU  ACAGAG AUAU AAA A
AGA  A                      A   C      AU      A    C   U
Stem-loop sequence CGACAAAGUGAUAGUAAUAUUGUUCACAAAAUUUACAUGUCUCAUAUAUUUUUAUAAACUAUAAGAGACAUAUGUAAACUUUAUGAACAAUGUUACUAUCACUUUAUCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT831299.1
ncRNA:24   UUGUUAUAAUGAUAGUGAAACAGC   1
  ||||||=|||||||||||||*|||
targets:892   AACAAUGUUACUAUCACUUUAUCG   915

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA205E03, full insert sequence NA coding protein psRNATarget