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BaseInfo

ncRNA ID novel_osa_miR1695
Species Oryza sativa
Class miRNA
Genome position Chr11:4529795-4529934 [+]
Reference genome IRGSP-1.0
Source SRR1743002;SRR1849773;SRR1849774;SRR2857728;SRR2857729;SRR2857730;SRR2857731;SRR2857732;SRR2857733;SRR3123645;SRR1738226
Length 24
Mature sequence(if miRNA) 117 - AUUUUGUCGGAUGAAGAAAUGACU - 140
Stem-loop(if miRNA) --                         UU        G   A      GUAC       -  A       U
  UCAUUUCUUCAUCCGACAAAGUGAU  GUAACAUU UUC CAAAAU    AUAUCUC CU UAUAGUU U
  |||||||||||||||||||||||||  |||||||| ||| ||||||    ||||||| || ||||||| A
  AGUAAAGAAGUAGGCUGUUUUACUA  CAUUGUAA AAG GUUUUA    UAUAGAG GA AUAUCAA U
UC                         -U        A   G      AACA       A  -       A
Stem-loop sequence UCAUUUCUUCAUCCGACAAAGUGAUUUGUAACAUUGUUCACAAAAUGUACAUAUCUCCUAUAUAGUUUUAUAAACUAUAAGAGAGAUAUACAAAUUUUGGGAAAAAUGUUACUAUCAUUUUGUCGGAUGAAGAAAUGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ236694.1
ncRNA:24   UCAGUAAAGAAGUAGGCUGUUUUA   1
  =*||||||||||||||||||||=*
targets:2   GAUCAUUUCUUCAUCCGACAAAGC   25

2.5 Sequence 2689 from Patent EP2985353 NA coding protein psRNATarget
JB165025.1
ncRNA:24   UCAGUAAAGAAGUAGGCUGUUUUA   1
  =*||||||||||||||||||||=*
targets:2   GAUCAUUUCUUCAUCCGACAAAGC   25

2.5 Sequence 2689 from Patent EP2559767 NA coding protein psRNATarget
HI404564.1
ncRNA:24   UCAGUAAAGAAGUAGGCUGUUUUA   1
  =*||||||||||||||||||||=*
targets:2   GAUCAUUUCUUCAUCCGACAAAGC   25

2.5 Sequence 2689 from Patent EP2074227 NA coding protein psRNATarget