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BaseInfo

ncRNA ID	novel_osa_miR1694
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:33050190-33050294 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556014
Length	24
Mature sequence(if miRNA)	1 - UAGGUUCAAUAGAUUCGUCUCGCG - 24
Stem-loop(if miRNA)	--     UA     U  A                A    GAAAAUAUUUA    AGC   CGAGA  AAUUU UU AGCCUAAUUAAUCCAU AUUA           CUGU   A   |||||  ||||| || |||||||||||||||| ||||           ||||   GCUCU  UUAGA AA UUGGAUUAAUUAGGUA UAAU           GAUA   U GC     GC     U  C                C    ---------AG    CAC
Stem-loop sequence	CGAGAUAAAUUUUUUAAGCCUAAUUAAUCCAUAAUUAGAAAAUAUUUACUGUAGCAUCACAUAGGAUAAUCAUGGAUUAAUUAGGUUCAAUAGAUUCGUCUCGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK064594.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   |||||||||||||||||||=|||| targets:555   CGCGAGACGAAUCUAUUGAGCCUA   578 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-112-G08, full insert sequence	NA	coding protein	psRNATarget
AK288793.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   |||||||||||||||||||=|||| targets:3130   CGCGAGACGAAUCUAUUGAGCCUA   3153 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090070C08, full insert sequence	NA	coding protein	psRNATarget
AK288720.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   |||||||||||||||||||=|||| targets:3898   CGCGAGACGAAUCUAUUGAGCCUA   3921 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090062N14, full insert sequence	NA	coding protein	psRNATarget
AK289081.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   ||=|=||||||||||||||=|||| targets:907   CGUGGGACGAAUCUAUUGAGCCUA   930 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090095E02, full insert sequence	NA	coding protein	psRNATarget
AK289087.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   ||||||||||||||*||||||||| targets:4245   CGCGAGACGAAUCUUUUGAACCUA   4268 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090095K03, full insert sequence	NA	coding protein	psRNATarget
AK100874.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   |||*|||||||||||||||=|||| targets:1015   CGCAAGACGAAUCUAUUGAGCCUA   1038 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023126D22, full insert sequence	NA	coding protein	psRNATarget
XM_015775655.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   |*||||||||||||*||||||||| targets:1853   CACGAGACGAAUCUUUUGAACCUA   1876 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group 4-hydroxyphenylacetaldehyde oxime monooxygenase (LOC4334792), mRNA	4-hydroxyphenylacetaldehyde oxime monooxygenase(LOC4334792)	coding protein	psRNATarget
JB164806.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   |||*|*|||||||||||||=|||| targets:95   CGCAAAACGAAUCUAUUGAGCCUA   118 Target Full Sequence	2.5	Sequence 2470 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236475.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   |||*|*|||||||||||||=|||| targets:95   CGCAAAACGAAUCUAUUGAGCCUA   118 Target Full Sequence	2.5	Sequence 2470 from Patent EP2985353	NA	coding protein	psRNATarget
HI404345.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   |||*|*|||||||||||||=|||| targets:95   CGCAAAACGAAUCUAUUGAGCCUA   118 Target Full Sequence	2.5	Sequence 2470 from Patent EP2074227	NA	coding protein	psRNATarget
AK288576.1	ncRNA:24   GCGCUCUGCUUAGAUAACUUGGAU   1   |*||||||*||||||||||=|||| targets:999   CACGAGACAAAUCUAUUGAGCCUA   1022 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090049B14, full insert sequence	NA	coding protein	psRNATarget