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BaseInfo

ncRNA ID novel_osa_miR1688
Species Oryza sativa
Class miRNA
Genome position Chr4:18555194-18555326 [-]
Reference genome IRGSP-1.0
Source SRR1298758;SRR2099436;SRR5049785;SRR1300837
Length 18
Mature sequence(if miRNA) 116 - AGGGAGAACUGCGAGGAG - 133
Stem-loop(if miRNA) --A             GGA  AUG      UC     A   GACCUUAAAUAACAGAGA    A AGAAGCAAACCU
   GGGAGAACUGCGA   GC   CUGUUG  AAUUA CAG                  CUCA G            U
   |||||||||||||   ||   ||||||  ||||| |||                  |||| |            U
   UCCUCUUGGCGUU   UG   GACAAC  UUAAU GUC                  CAAC G            G
UCC             ---  AUA      -U     C   -----------------G    - UCUCUGUUGAGA
Stem-loop sequence AGGGAGAACUGCGAGGAGCAUGCUGUUGUCAAUUAACAGGACCUUAAAUAACAGAGACUCAAGAGAAGCAAACCUUUGAGAGUUGUCUCUGCAACGCUGCUAAUUUCAACAGAUAGUUUGCGGUUCUCCUCCU