ncRNA ID | novel_osa_miR1688 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:18555194-18555326 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1298758;SRR2099436;SRR5049785;SRR1300837 |
Length | 18 |
Mature sequence(if miRNA) | 116 - AGGGAGAACUGCGAGGAG - 133 |
Stem-loop(if miRNA) |
--A             GGA  AUG      UC     A   GACCUUAAAUAACAGAGA    A AGAAGCAAACCU    GGGAGAACUGCGA   GC   CUGUUG  AAUUA CAG                  CUCA G            U    |||||||||||||   ||   ||||||  ||||| |||                  |||| |            U    UCCUCUUGGCGUU   UG   GACAAC  UUAAU GUC                  CAAC G            G UCC             ---  AUA      -U     C   -----------------G    - UCUCUGUUGAGA |
Stem-loop sequence | AGGGAGAACUGCGAGGAGCAUGCUGUUGUCAAUUAACAGGACCUUAAAUAACAGAGACUCAAGAGAAGCAAACCUUUGAGAGUUGUCUCUGCAACGCUGCUAAUUUCAACAGAUAGUUUGCGGUUCUCCUCCU |