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BaseInfo

ncRNA ID novel_osa_miR1676
Species Oryza sativa
Class miRNA
Genome position Chr11:16437029-16437087 [+]
Reference genome IRGSP-1.0
Source SRR1743002;SRR1743006;SRR2857734;SRR2857736
Length 22
Mature sequence(if miRNA) 1 - UUUUUUAAUAGAACCGACACCU - 22
Stem-loop(if miRNA) --      AA                 AU
  UUUUUU  UAGAACCGACACCUAUA  A
  ||||||  |||||||||||||||||  U
  AAAAAG  AUCUUGGCUGUGGAUAU  A
CC      AG                 AA
Stem-loop sequence UUUUUUAAUAGAACCGACACCUAUAAUAUAAAUAUAGGUGUCGGUUCUAGAGAAAAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289022.1
ncRNA:22   UCCACAGCCAAGAUAAUUUUUU   1
  ||||||||*|||||||||||||
targets:1328   AGGUGUCGAUUCUAUUAAAAAA   1349

1.0 Oryza sativa Japonica Group cDNA, clone: J090090G17, full insert sequence NA coding protein psRNATarget