| ncRNA ID | novel_osa_miR1668 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr6:3643754-3643864 [+] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1743000;SRR2099428 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - AGAAAAAUGCAUCAACAUCCA - 21 |
| Stem-loop(if miRNA) |
-- C U U UUCAUUAA - U AA AGAAAAAUGCAUCAA AUCCACAAUA CAAAU AGU AUAC AUCA GA U ||||||||||||||| |||||||||| ||||| ||| |||| |||| || UCUUUUUACGUGGUU UAGGUGUUAU GUUUA UCA UAUG UAGU CU A UA A U U -------- A U GU |
| Stem-loop sequence | AGAAAAAUGCAUCAACAUCCACAAUAUCAAAUUAGUUUCAUUAAAUACAUCAUGAAAUAUGUCUUGAUAGUAUACUUAUUUGUUAUUGUGGAUAUUGGUGCAUUUUUCUAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015785808.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At5g48730, chloroplastic (LOC4340271), transcript variant X2, mRNA | pentatricopeptide repeat-containing protein At5g48730, chloroplastic(LOC4340271) | coding protein | psRNATarget | |||||||||
| AK241240.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J065128J11, full insert sequence | NA | coding protein | psRNATarget |