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BaseInfo

ncRNA ID	novel_osa_miR1667
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:22374116-22374255 [+]
Reference genome	IRGSP-1.0
Source	SRR1743000;SRR2857729;SRR2857732
Length	21
Mature sequence(if miRNA)	120 - UUGUCGGAUGAAGAAAUGACU - 140
Stem-loop(if miRNA)	--                   A  G        A      CACA      C    A      AUAA    U   UCAUUUCUUCAUCCGAUAA GU AUUUAUAA AUUGUU    AAAAUG ACAU UCUCUU    AGUU A   ||||||||||||||||||| || |||||||| ||||||    |||||| |||| ||||||    |||| U   AGUAAAGAAGUAGGCUGUU CA UAAAUAUU UAACAA    UUUUAC UGUA AGAGAA    UCAA A UC                   C  A        C      -UUA      A    G      --CA    A
Stem-loop sequence	UCAUUUCUUCAUCCGAUAAAGUGAUUUAUAAAAUUGUUCACAAAAAUGCACAUAUCUCUUAUAAAGUUUAUAAAACUACAAGAGAGAUGUACAUUUUAUUAACAAUCUUAUAAAUAACCUUGUCGGAUGAAGAAAUGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ236694.1	ncRNA:21   UCAGUAAAGAAGUAGGCUGUU   1   =*||||||||||||||||||| targets:2   GAUCAUUUCUUCAUCCGACAA   22 Target Full Sequence	0.0	Sequence 2689 from Patent EP2985353	NA	coding protein	psRNATarget
JB165025.1	ncRNA:21   UCAGUAAAGAAGUAGGCUGUU   1   =*||||||||||||||||||| targets:2   GAUCAUUUCUUCAUCCGACAA   22 Target Full Sequence	0.0	Sequence 2689 from Patent EP2559767	NA	coding protein	psRNATarget
HI404564.1	ncRNA:21   UCAGUAAAGAAGUAGGCUGUU   1   =*||||||||||||||||||| targets:2   GAUCAUUUCUUCAUCCGACAA   22 Target Full Sequence	0.0	Sequence 2689 from Patent EP2074227	NA	coding protein	psRNATarget
AK289001.1	ncRNA:21   UCAGUAAAGAAGUAGGCUGUU   1   =|||||||||||||*|||||| targets:5   GGUCAUUUCUUCAUACGACAA   25 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090088H22, full insert sequence	NA	coding protein	psRNATarget