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BaseInfo

ncRNA ID novel_osa_miR1643
Species Oryza sativa
Class miRNA
Genome position Chr5:16686276-16686382 [+]
Reference genome IRGSP-1.0
Source SRR1743000;SRR5351737
Length 24
Mature sequence(if miRNA) 1 - AGAAAUGCUAUCGCCGUUAGGGUC - 24
Stem-loop(if miRNA) --    A         CGU       --  G    UCCCAC  C  UA    UA
  AGAA UGCUAUCGC   UAGGGUC  CC UCCA      GC AU  AAUG  C
  |||| |||||||||   |||||||  || ||||      || ||  ||||  U
  UCUU AUGGUAGCG   AUCCCAG  GG AGGU      CG UA  UUAC  U
AA    C         AUU       UA  G    CAUUCA  A  UA    UU
Stem-loop sequence AGAAAUGCUAUCGCCGUUAGGGUCCCGUCCAUCCCACGCCAUUAAAUGUACUUUUCAUUAUAUAGCACUUACUGGAGGGAUGACCCUAUUAGCGAUGGUACUUCUAA