ncRNA ID | novel_osa_miR1642 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr5:11894584-11894703 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743000;SRR3123645;SRR1738226 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAUUGUCCAGUGUCAAUUGUGAC - 24 |
Stem-loop(if miRNA) |
--      UCC              C  CCACAUAAUUUU  -A       G UCCAAAC   AUAUUG   AGUGUCAAUUGUGA CA            GG  UGAGUGG A       A   ||||||   |||||||||||||| ||            ||  ||||||| |       U   UAUAAC   UCACAGUUAACACU GU            CC  ACUCACC U       G AA      UUA              U  ACCUAUAUAACU  AA       G UAAAUAC |
Stem-loop sequence | AUAUUGUCCAGUGUCAAUUGUGACCACCACAUAAUUUUGGAUGAGUGGGAUCCAAACAUGCAUAAAUUGCCACUCAAACCUCAAUAUAUCCAUGUUCACAAUUGACACUAUUCAAUAUAA |