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BaseInfo

ncRNA ID	novel_osa_miR1617
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:29357660-29357756 [-]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	24
Mature sequence(if miRNA)	74 - AUAAAAAUCAAUCUAAUAUCGGAU - 97
Stem-loop(if miRNA)	--A       C       U  CG       C             U  AG    UAAAAAU AAUCUAA AU  GAUAUGA ACAUUCUAAUACA AC  A    ||||||| ||||||| ||  ||||||| ||||||||||||| ||    GUUUUUG UUAGAUU UA  CUAUACU UGUAAGAUUAUGU UG  U AGG       U       U  AU       A             -  UU
Stem-loop sequence	AUAAAAAUCAAUCUAAUAUCGGAUAUGACACAUUCUAAUACAUACAGAUUUGUUGUAUUAGAAUGUAUCAUAUCUAAUUUUAGAUUUGUUUUUGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK287908.1	ncRNA:24   UAGGCUAUAAUCUAACUAAAAAUA   1   |||||=||*||||||||||||||* targets:1282   AUCCGGUACUAGAUUGAUUUUUAA   1305 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J065212K06, full insert sequence	NA	coding protein	psRNATarget
AK099958.1	ncRNA:24   UAGGCUAUAAUCUAACUAAAAAUA   1   ||||*|||*|||||||=||||||| targets:1166   AUCCAAUACUAGAUUGGUUUUUAU   1189 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013126A13, full insert sequence	NA	coding protein	psRNATarget
AK071925.1	ncRNA:24   UAGGCUAUAAUCUAACUAAAAAUA   1   ||||*|||*|||||||=||||||| targets:1165   AUCCAAUACUAGAUUGGUUUUUAU   1188 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013069L02, full insert sequence	NA	coding protein	psRNATarget