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BaseInfo

ncRNA ID	novel_osa_miR1614
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:31372811-31372927 [-]
Reference genome	IRGSP-1.0
Source	SRR1743000;SRR3123630;SRR3123650;SRR1738225;SRR1738239
Length	24
Mature sequence(if miRNA)	94 - AACCGCGAGACGAAUAUUUUGAGC - 117
Stem-loop(if miRNA)	---AAC            A    G   C      A  CG C    -   CAU   GGUU       CGCGAGACGAAU UUUU AGC UAAUUA UC  U AUUA CCA   GUG    A       |||||||||||| |||| ||| |||||| ||  | |||| |||   |||    C       GUGCUCUGCUUA AAAA UCG AUUAAU AG  A UAAU GGU   CAC    U UUUUUA            G    A   U      C  AU C    C   AUU   AAUG
Stem-loop sequence	AACCGCGAGACGAAUAUUUUGAGCCUAAUUAAUCCGUCAUUACCACAUGUGGGUUACUGUAACACUUAUGGCUAAUCAUAGACUAAUUAUGCUAAAAAGAUUCGUCUCGUGAUUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK121199.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   ||||||||*||||||||||=|||| targets:1470   GCUCAAAAGAUUCGUCUCGUGGUU   1493 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023087G06, full insert sequence	NA	coding protein	psRNATarget
CT833754.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   |||=||||*||||||||||=|||| targets:808   GCUUAAAAGAUUCGUCUCGUGGUU   831 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI026E11, full insert sequence	NA	coding protein	psRNATarget
AK062636.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   |||=||||*||||||||||=|||| targets:806   GCUUAAAAGAUUCGUCUCGUGGUU   829 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-105-D02, full insert sequence	NA	coding protein	psRNATarget
XM_015790304.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   |||=||||*||||||||||=|||| targets:814   GCUUAAAAGAUUCGUCUCGUGGUU   837 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group RING-H2 finger protein ATL45 (LOC4344335), mRNA	RING-H2 finger protein ATL45(LOC4344335)	coding protein	psRNATarget
CT831461.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   *||=||||*||||||||||||||| targets:438   UCUUAAAAGAUUCGUCUCGCGGUU   461 Target Full Sequence	1.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110A21, full insert sequence	NA	coding protein	psRNATarget
AK103318.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   ||||||||*||||||||||||*|| targets:1157   GCUCAAAAGAUUCGUCUCGCGAUU   1180 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033125I08, full insert sequence	NA	coding protein	psRNATarget
XM_015761412.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   ||||||||*||||||||||||*|| targets:635   GCUCAAAAGAUUCGUCUCGCGAUU   658 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group nucleobase-ascorbate transporter 2 (LOC4325616), mRNA	nucleobase-ascorbate transporter 2(LOC4325616)	coding protein	psRNATarget
AK067512.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   ||||||||*||||||||||||*|| targets:1191   GCUCAAAAGAUUCGUCUCGCGAUU   1214 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013109G08, full insert sequence	NA	coding protein	psRNATarget
AK288422.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   |||=||*|*||||||||||||||| targets:705   GCUUAAUAAAUUCGUCUCGCGGUU   728 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090032F09, full insert sequence	NA	coding protein	psRNATarget
AK071854.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   |||=||*|*||||||||||||||| targets:612   GCUUAAUAAAUUCGUCUCGCGGUU   635 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023117P14, full insert sequence	NA	coding protein	psRNATarget
AK071825.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   |||=||*|*||||||||||||||| targets:1400   GCUUAAUAAAUUCGUCUCGCGGUU   1423 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023115H13, full insert sequence	NA	coding protein	psRNATarget
AK241427.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   |||=||*|*||||||||||||||| targets:1519   GCUUAAUAAAUUCGUCUCGCGGUU   1542 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J065161N01, full insert sequence	NA	coding protein	psRNATarget
AK103332.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   |||=||*|*||||||||||||||| targets:1009   GCUUAAUAAAUUCGUCUCGCGGUU   1032 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J033125N22, full insert sequence	NA	coding protein	psRNATarget
AK101179.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   |||=||||*||||||||||||*|| targets:2728   GCUUAAAAGAUUCGUCUCGCGAUU   2751 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033029D23, full insert sequence	NA	coding protein	psRNATarget
XM_015782486.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   *||=||*|*||||||||||||||| targets:1439   CCUUAAUAAAUUCGUCUCGCGGUU   1462 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group GDSL esterase/lipase At5g45910 (LOC9269310), mRNA	GDSL esterase/lipase At5g45910(LOC9269310)	coding protein	psRNATarget
AK241401.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   *||=||*|*||||||||||||||| targets:1440   CCUUAAUAAAUUCGUCUCGCGGUU   1463 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J065158N07, full insert sequence	NA	coding protein	psRNATarget
AK289081.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   *||-||||*|||=||||||||||| targets:1382   ACU-AAAAAAUUUGUCUCGCGGUU   1404 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090095E02, full insert sequence	NA	coding protein	psRNATarget
AK288820.1	ncRNA:24   CGAGUUUUAUAAGCAGAGCGCCAA   1   *|*|||||*||||||||||||*|| targets:3106   ACACAAAAGAUUCGUCUCGCGAUU   3129 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090073D04, full insert sequence	NA	coding protein	psRNATarget