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BaseInfo

ncRNA ID	novel_osa_miR1612
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:15171968-15172144 [-]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	24
Mature sequence(if miRNA)	1 - GUUUGCGGAGUGAUAUGUUACAUA - 24
Stem-loop(if miRNA)	--                A                          C                          UU    G     A   A   UGUAACAUAUCACUCC CAAACAUGCAAGUUCAAAUUCAACUU UACAAGUUGUAACAAAAAUAACAAAU  AACU UAAAU UAC U   |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||| ||||| ||| A   ACAUUGUAUAGUGAGG GUUUGUACGUUCAAGUUUAAGUUGAA AUGUUCAAUAUUGUUUUUAUUGUUUG  UUGA GUUUA AUG U AU                C                          A                          UU    -     -   A
Stem-loop sequence	UGUAACAUAUCACUCCACAAACAUGCAAGUUCAAAUUCAACUUCUACAAGUUGUAACAAAAAUAACAAAUUUAACUGUAAAUAUACAUAUAGUAAUUUGAGUUUUGUUUGUUAUUUUUGUUAUAACUUGUAAAAGUUGAAUUUGAACUUGCAUGUUUGCGGAGUGAUAUGUUACAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015781215.1	ncRNA:24   AUACAUUGUAUAGUGAGGCGUUUG   1   |||||||=||||||||||*||||| targets:800   UAUGUAAUAUAUCACUCCACAAAC   823 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative beta-glucosidase 15 (LOC107280799), mRNA	putative beta-glucosidase 15(LOC107280799)	coding protein	psRNATarget
AK072337.1	ncRNA:24   AUACAUUGUAUAGUGAGGCGUUUG   1   ||||*||=||||||||||*||||| targets:1506   UAUGAAAUAUAUCACUCCACAAAC   1529 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023043H01, full insert sequence	NA	coding protein	psRNATarget
XM_015760067.1	ncRNA:24   AUACAUUGUAUAGUGAGGCGUUUG   1   |||**||=||||||||||*||||| targets:1679   UAUAAAAUAUAUCACUCCACAAAC   1702 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group dirigent protein 23-like (LOC107278568), transcript variant X3, mRNA	dirigent protein 23-like(LOC107278568)	coding protein	psRNATarget
XM_015760066.1	ncRNA:24   AUACAUUGUAUAGUGAGGCGUUUG   1   |||**||=||||||||||*||||| targets:1685   UAUAAAAUAUAUCACUCCACAAAC   1708 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group dirigent protein 23-like (LOC107278568), transcript variant X2, mRNA	dirigent protein 23-like(LOC107278568)	coding protein	psRNATarget
AK070412.1	ncRNA:24   AUACAUUGUAUAGUGAGGCGUUUG   1   |||**||=||||||||||*||||| targets:79   UAUUAAAUAUAUCACUCCACAAAC   102 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023054E23, full insert sequence	NA	coding protein	psRNATarget
XM_015760065.1	ncRNA:24   AUACAUUGUAUAGUGAGGCGUUUG   1   |||**||=||||||||||*||||| targets:5457   UAUAAAAUAUAUCACUCCACAAAC   5480 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group dirigent protein 23-like (LOC107278568), transcript variant X1, mRNA	dirigent protein 23-like(LOC107278568)	coding protein	psRNATarget