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BaseInfo

ncRNA ID	novel_osa_miR1605
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:5536881-5536987 [-]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	24
Mature sequence(if miRNA)	84 - AAUCUAGAACUAAAUGUGACACAU - 107
Stem-loop(if miRNA)	--   C   A   AA            C  UUACAAUAAAUC       C      AA   AAU UAG ACU  AUGUGACACAUU UA            UAUAAAU UAGAUA  G   ||| ||| |||  |||||||||||| ||            ||||||| ||||||   UUA AUU UGA  UACACUGUGUAA AU            AUAUUUA AUCUAU  A GA   U   A   -C            A  --------UAUC       A      AU
Stem-loop sequence	AAUCUAGAACUAAAUGUGACACAUUCUAUUACAAUAAAUCUAUAAAUCUAGAUAAAGAUAUAUCUAAAUUUAUACUAUUAAAAUGUGUCACAUCAGUAUUAUAUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015774466.1	ncRNA:24   UACACAGUGUAAAUCAAGAUCUAA   1   ||*|*|||=|||||||*||||||| targets:1537   AUAUAUCAUAUUUAGUACUAGAUU   1560 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group transcription factor NAI1 (LOC4333691), transcript variant X1, mRNA	transcription factor NAI1(LOC4333691)	coding protein	psRNATarget
XM_015774467.1	ncRNA:24   UACACAGUGUAAAUCAAGAUCUAA   1   ||*|*|||=|||||||*||||||| targets:1526   AUAUAUCAUAUUUAGUACUAGAUU   1549 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group transcription factor NAI1 (LOC4333691), transcript variant X2, mRNA	transcription factor NAI1(LOC4333691)	coding protein	psRNATarget
AK107190.1	ncRNA:24   UACACAGUGUAAAUCAAGAUCUAA   1   ||*|*|||=|||||||*||||||| targets:1394   AUAUAUCAUAUUUAGUACUAGAUU   1417 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-125-A03, full insert sequence	NA	coding protein	psRNATarget
BT132609.1	ncRNA:24   UACACAGUGUAAAUCAAGAUCUAA   1   ||*|*|||=|||||||*||||||| targets:227   AUAUAUCAUAUUUAGUACUAGAUU   250 Target Full Sequence	2.5	Oryza sativa clone RRlibB00348 mRNA sequence	NA	coding protein	psRNATarget