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BaseInfo

ncRNA ID novel_osa_miR1601
Species Oryza sativa
Class miRNA
Genome position Chr3:15290796-15290906 [-]
Reference genome IRGSP-1.0
Source SRR1743000;SRR1743006;SRR1849766;SRR2040380;SRR2040381;SRR2040384;SRR2040388;SRR2040392;SRR2040393;SRR2040395;SRR2040399;SRR2040401;SRR2040402;SRR2040403;SRR2040406;SRR2040407;SRR2040409;SRR2857730;SRR2857732;SRR2857734;SRR3123630;SRR3123650;SRR1738211;SRR1738225;SRR1738239
Length 24
Mature sequence(if miRNA) 88 - AACCAAUUUACUUAUGAUAGAGAC - 111
Stem-loop(if miRNA) --                    A     CAAAAUAU    --      U    ACCU
  AACCAAUUUACUUAUGAUAG GACAA        UCGG  AUUAGU CCAC    C
  |||||||||||||||||||| |||||        ||||  |||||| ||||    U
  UUGGUUAAAUGAAUAUUAUC CUGUU        GGCC  UAGUUA GGUG    U
CU                    C     -AUUCUCU    AU      -    AUCA
Stem-loop sequence AACCAAUUUACUUAUGAUAGAGACAACAAAAUAUUCGGAUUAGUUCCACACCUCUUACUAGUGGAUUGAUUACCGGUCUCUUAUUGUCCCUAUUAUAAGUAAAUUGGUUUC