ncRNA ID | novel_osa_miR1601 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:15290796-15290906 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1743000;SRR1743006;SRR1849766;SRR2040380;SRR2040381;SRR2040384;SRR2040388;SRR2040392;SRR2040393;SRR2040395;SRR2040399;SRR2040401;SRR2040402;SRR2040403;SRR2040406;SRR2040407;SRR2040409;SRR2857730;SRR2857732;SRR2857734;SRR3123630;SRR3123650;SRR1738211;SRR1738225;SRR1738239 |
Length | 24 |
Mature sequence(if miRNA) | 88 - AACCAAUUUACUUAUGAUAGAGAC - 111 |
Stem-loop(if miRNA) |
--                    A     CAAAAUAU    --      U    ACCU   AACCAAUUUACUUAUGAUAG GACAA        UCGG  AUUAGU CCAC    C   |||||||||||||||||||| |||||        ||||  |||||| ||||    U   UUGGUUAAAUGAAUAUUAUC CUGUU        GGCC  UAGUUA GGUG    U CU                    C     -AUUCUCU    AU      -    AUCA |
Stem-loop sequence | AACCAAUUUACUUAUGAUAGAGACAACAAAAUAUUCGGAUUAGUUCCACACCUCUUACUAGUGGAUUGAUUACCGGUCUCUUAUUGUCCCUAUUAUAAGUAAAUUGGUUUC |