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BaseInfo

ncRNA ID novel_osa_miR1600
Species Oryza sativa
Class miRNA
Genome position Chr3:19524944-19525152 [-]
Reference genome IRGSP-1.0
Source SRR1743000
Length 25
Mature sequence(if miRNA) 1 - AAACACUAGAACCAUAAUACCCAGG - 25
Stem-loop(if miRNA) --UA                 --    C      U       A       U  --G   -        ACAAAAUA   AAUGCUUAACUAGGUGGCUAAUUGAUCAA
    GGUAUUAUGGUUUUAGU  UUCA AAAACC CACUUUU ACUAAUU GA   UUG CUACUAUA        AAG                             A
    |||||||||||||||||  |||| |||||| ||||||| ||||||| ||   ||| ||||||||        |||                             A
    CCAUAAUACCAAGAUCA  AAGU UUUUGG GUGGAAA UGGUUAA CU   AAC GGUGGUAU        UCA                             G
GGAC                 CA    A      U       C       -  AGA   U        --GAAUAC   AGAUUUUAGUUUAUACCUUAAAUACAUAA
Stem-loop sequence UAGGUAUUAUGGUUUUAGUUUCACAAAACCUCACUUUUAACUAAUUUGAGUUGCUACUAUAACAAAAUAAAGAAUGCUUAACUAGGUGGCUAAUUGAUCAAAAGAAUACAUAAAUUCCAUAUUUGAUUUUAGAACUCAUAAGUAUGGUGGUCAAAGAUCAAUUGGUCAAAGGUGUGGUUUUAUGAAACACUAGAACCAUAAUACCCAGG