ncRNA ID | novel_osa_miR1600 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:19524944-19525152 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1743000 |
Length | 25 |
Mature sequence(if miRNA) | 1 - AAACACUAGAACCAUAAUACCCAGG - 25 |
Stem-loop(if miRNA) |
--UA                 --    C      U       A       U  --G   -        ACAAAAUA   AAUGCUUAACUAGGUGGCUAAUUGAUCAA     GGUAUUAUGGUUUUAGU  UUCA AAAACC CACUUUU ACUAAUU GA   UUG CUACUAUA        AAG                             A     |||||||||||||||||  |||| |||||| ||||||| ||||||| ||   ||| ||||||||        |||                             A     CCAUAAUACCAAGAUCA  AAGU UUUUGG GUGGAAA UGGUUAA CU   AAC GGUGGUAU        UCA                             G GGAC                 CA    A      U       C       -  AGA   U        --GAAUAC   AGAUUUUAGUUUAUACCUUAAAUACAUAA |
Stem-loop sequence | UAGGUAUUAUGGUUUUAGUUUCACAAAACCUCACUUUUAACUAAUUUGAGUUGCUACUAUAACAAAAUAAAGAAUGCUUAACUAGGUGGCUAAUUGAUCAAAAGAAUACAUAAAUUCCAUAUUUGAUUUUAGAACUCAUAAGUAUGGUGGUCAAAGAUCAAUUGGUCAAAGGUGUGGUUUUAUGAAACACUAGAACCAUAAUACCCAGG |