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BaseInfo

ncRNA ID	novel_osa_miR1590
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:27734966-27735069 [+]
Reference genome	IRGSP-1.0
Source	SRR1743000;SRR2857732;SRR1738241
Length	24
Mature sequence(if miRNA)	81 - GAAUAUAGACAAUGCUAGAAAGUC - 104
Stem-loop(if miRNA)	--            AC  -     AAUU    A      G          CAU   CUUUUUAGCGUU  UC AUAUU    UAGA GUUAAU AAUCUAGACA   A   ||||||||||||  || |||||    |||| |||||| ||||||||||   GAAAGAUCGUAA  AG UAUAA    AUCU CAAUUA UUAGAUCUGU   U CU            -C  A     GUAU    A      A          AUA
Stem-loop sequence	CUUUUUAGCGUUACUCAUAUUAAUUUAGAAGUUAAUGAAUCUAGACACAUAUAUAUGUCUAGAUUAAUUAACAUCUAUAUGAAUAUAGACAAUGCUAGAAAGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK067363.1	ncRNA:24   CUGAAAGAUCGUAACAGAUAUAAG   1   ||||||=||||||||||||||||| targets:965   GACUUUUUAGCAUUGUCUAUAUUC   988 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013100G02, full insert sequence	NA	coding protein	psRNATarget
CT833624.1	ncRNA:24   CUGAAAGAUCGUAACAGAUAUAAG   1   |||||||||||||||||*|||||| targets:1041   GACUUUCUAGCAUUGUCCAUAUUC   1064 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN046D04, full insert sequence	NA	coding protein	psRNATarget
XM_015791317.1	ncRNA:24   CUGAAAGAUCGUAACAGAUAUAAG   1   |||||*|||||||||||*|||||| targets:4439   GACUUCCUAGCAUUGUCCAUAUUC   4462 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342778 (LOC4342778), transcript variant X1, mRNA	uncharacterized LOC4342778(Os07g0231700)	coding protein	psRNATarget
XM_015786027.1	ncRNA:24   CUGAAAGAUCGUAACAGAUAUAAG   1   |||*|||||||||||*|||||||| targets:4279   GACCUUCUAGCAUUGCCUAUAUUC   4302 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group ABC transporter C family member 8 (LOC9267441), mRNA	ABC transporter C family member 8(LOC9267441)	coding protein	psRNATarget