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BaseInfo

ncRNA ID	novel_osa_miR1583
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:22771599-22771661 [-]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	24
Mature sequence(if miRNA)	40 - AACAACCAGGACUAAAGAUAUCUU - 63
Stem-loop(if miRNA)	--       A                        AACAACC GGACUAAAGAUAUCUUUAGUCC   ||||||| |||||||||||||||||||||C   UUGUUGG CCUGAUUUCUAUAGAAAUCAGG AG       C
Stem-loop sequence	AACAACCAGGACUAAAGAUAUCUUUAGUCCCGGACUAAAGAUAUCUUUAGUCCCGGUUGUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288859.1	ncRNA:24   UUCUAUAGAAAUCAGGACCAACAA   1   ||||||||||||||||*||||||| targets:2234   AAGAUAUCUUUAGUCCCGGUUGUU   2257 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090076J15, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:24   UUCUAUAGAAAUCAGGACCAACAA   1   |||||||=|||||||||||||*|| targets:314   AAGAUAUUUUUAGUCCUGGUUUUU   337 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:24   UUCUAUAGAAAUCAGGACCAACAA   1   **|=||||||||||||*||||||| targets:1418   UUGGUAUCUUUAGUCCCGGUUGUU   1441 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK061057.1	ncRNA:24   UUCUAUAGAAAUCAGGACCAACAA   1   =||=-|||||||||||||||||*| targets:304   GAGG-AUCUUUAGUCCUGGUUGGU   326 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
AK288191.1	ncRNA:24   UUCUAUAGAAAUCAGGACCAACAA   1   *****|||||||||||*||||||| targets:1558   UUUUGAUCUUUAGUCCCGGUUGUU   1581 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090007A11, full insert sequence	NA	coding protein	psRNATarget