ncRNA ID | novel_osa_miR1577 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:30636627-30636697 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743000;SRR2857728;SRR3123646;SRR3123651;SRR1738228;SRR1738240 |
Length | 24 |
Mature sequence(if miRNA) | 48 - AUAUUUCGACUGUAACUGCACUGU - 71 |
Stem-loop(if miRNA) |
--   -          -        ACAGAAA    A   AGU CAGUUACAGU GAGGUAUA       UUAC A   ||| |||||||||| ||||||||       ||||   UCA GUCAAUGUCA CUUUAUAU       AAUG C UG   C          G        -GGAGUG    U |
Stem-loop sequence | AGUCAGUUACAGUGAGGUAUAACAGAAAUUACAACUGUAAGUGAGGUAUAUUUCGACUGUAACUGCACUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK100562.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023104G23, full insert sequence | NA | coding protein | psRNATarget |