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BaseInfo

ncRNA ID	novel_osa_miR1558
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:12622414-12622552 [+]
Reference genome	IRGSP-1.0
Source	SRR1743000;SRR2857730;SRR2857731;SRR2857733;SRR3123645;SRR1738226;SRR1738227
Length	21
Mature sequence(if miRNA)	119 - UUGUCGGAUGAAGAAAUGACU - 139
Stem-loop(if miRNA)	--        A                              C               A  A   -    U   UCAUUUCU CAUCCGACAAAGUGAUAGUAACAUUGUUCA AAAAUUUACAUCUCU UC UUU GUUU U   |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| || ||| ||||   AGUAAAGA GUAGGCUGUUUCACUAUUAUUGUAACAAGU UUUUAAAUGUAGAGA AG AGA CAAA A UC        A                              A               G  A   U    U
Stem-loop sequence	UCAUUUCUACAUCCGACAAAGUGAUAGUAACAUUGUUCACAAAAUUUACAUCUCUAUCAUUUGUUUUUAUAAACUAGAAGAGAGAGAUGUAAAUUUUAUGAACAAUGUUAUUAUCACUUUGUCGGAUGAAGAAAUGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ236694.1	ncRNA:21   UCAGUAAAGAAGUAGGCUGUU   1   =*||||||||||||||||||| targets:2   GAUCAUUUCUUCAUCCGACAA   22 Target Full Sequence	0.0	Sequence 2689 from Patent EP2985353	NA	coding protein	psRNATarget
JB165025.1	ncRNA:21   UCAGUAAAGAAGUAGGCUGUU   1   =*||||||||||||||||||| targets:2   GAUCAUUUCUUCAUCCGACAA   22 Target Full Sequence	0.0	Sequence 2689 from Patent EP2559767	NA	coding protein	psRNATarget
HI404564.1	ncRNA:21   UCAGUAAAGAAGUAGGCUGUU   1   =*||||||||||||||||||| targets:2   GAUCAUUUCUUCAUCCGACAA   22 Target Full Sequence	0.0	Sequence 2689 from Patent EP2074227	NA	coding protein	psRNATarget
AK289001.1	ncRNA:21   UCAGUAAAGAAGUAGGCUGUU   1   =|||||||||||||*|||||| targets:5   GGUCAUUUCUUCAUACGACAA   25 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090088H22, full insert sequence	NA	coding protein	psRNATarget