ncRNA ID | novel_osa_miR1545 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:7400349-7400552 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743000;SRR2040409 |
Length | 20 |
Mature sequence(if miRNA) | 185 - UUGGGUGAGUACGAAUUACC - 204 |
Stem-loop(if miRNA) |
--     A      C U   UUUCAU      --   UAACUGCUUUAAGUUUUACCAAAUUUGUAGAAAAAAUAAGUAAUAUUUUUAACCCGAGAUAAAUUUA   UAAUU GUACUC C CCG      UUCAGG  UUA                                                                   U   ||||| |||||| | |||      ||||||  |||                                                                   U   AUUAA CAUGAG G GGU      AAGUCC  CAU                                                                   A CC     G      U -   --UAUC      CC   UAAGCAUGAAAAAGGAUAAAUAUUAUGAUCUAAUCAAAGUAGUUUAGUUAUUAACUUAUAUAAAAGU |
Stem-loop sequence | UAAUUAGUACUCCCUCCGUUUCAUUUCAGGUUAUAACUGCUUUAAGUUUUACCAAAUUUGUAGAAAAAAUAAGUAAUAUUUUUAACCCGAGAUAAAUUUAUUAUGAAAAUAUAUUCAAUUAUUGAUUUGAUGAAACUAAUCUAGUAUUAUAAAUAGGAAAAAGUACGAAUUACCCCCUGAACUAUUGGGUGAGUACGAAUUACC |