Search result

BaseInfo

ncRNA ID novel_osa_miR1545
Species Oryza sativa
Class miRNA
Genome position Chr12:7400349-7400552 [+]
Reference genome IRGSP-1.0
Source SRR1743000;SRR2040409
Length 20
Mature sequence(if miRNA) 185 - UUGGGUGAGUACGAAUUACC - 204
Stem-loop(if miRNA) --     A      C U   UUUCAU      --   UAACUGCUUUAAGUUUUACCAAAUUUGUAGAAAAAAUAAGUAAUAUUUUUAACCCGAGAUAAAUUUA
  UAAUU GUACUC C CCG      UUCAGG  UUA                                                                   U
  ||||| |||||| | |||      ||||||  |||                                                                   U
  AUUAA CAUGAG G GGU      AAGUCC  CAU                                                                   A
CC     G      U -   --UAUC      CC   UAAGCAUGAAAAAGGAUAAAUAUUAUGAUCUAAUCAAAGUAGUUUAGUUAUUAACUUAUAUAAAAGU
Stem-loop sequence UAAUUAGUACUCCCUCCGUUUCAUUUCAGGUUAUAACUGCUUUAAGUUUUACCAAAUUUGUAGAAAAAAUAAGUAAUAUUUUUAACCCGAGAUAAAUUUAUUAUGAAAAUAUAUUCAAUUAUUGAUUUGAUGAAACUAAUCUAGUAUUAUAAAUAGGAAAAAGUACGAAUUACCCCCUGAACUAUUGGGUGAGUACGAAUUACC