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BaseInfo

ncRNA ID	novel_osa_miR1537
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:6302849-6303034 [-]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	24
Mature sequence(if miRNA)	163 - AGCCCUCGACACGAUCUACAACUU - 186
Stem-loop(if miRNA)	--          A                       UUU     AUU     U -    UUU            -----------------------       A   AGCCCUCGAC CGAUCUACAACUUUGUAGUUGAA   UUUUU   UUAAG C AUUU   GUCUCAAAAUAU                       AAUUUUA A   |||||||||| |||||||||||||||||||||||   |||||   ||||| | ||||   ||||||||||||                       |||||||   UCGGGAGCUG GCUGGAUGUUGAAACAUCAACUU   AAAAA   AAUUU G UAAA   CAGGGUUUUAUA                       UUAAAAU A CA          C                       UUC     CUU     U A    UCC            AUAACGUACAAAUAUCUAAAACU       U
Stem-loop sequence	AGCCCUCGACACGAUCUACAACUUUGUAGUUGAAUUUUUUUUAUUUUAAGUCAUUUUUUGUCUCAAAAUAUAAUUUUAAAAUUAAAAUUUCAAAAUCUAUAAACAUGCAAUAAUAUUUUGGGACCCUAAAUAGUUUUAAUUCAAAAACUUUUCAACUACAAAGUUGUAGGUCGCGUCGAGGGCUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB164658.1	ncRNA:24   UUCAACAUCUAGCACAGCUCCCGA   1   |||||||||||||*|||||||||| targets:165   AAGUUGUAGAUCGCGUCGAGGGCU   188 Target Full Sequence	1.5	Sequence 2322 from Patent EP2559767	NA	coding protein	psRNATarget
HI404197.1	ncRNA:24   UUCAACAUCUAGCACAGCUCCCGA   1   |||||||||||||*|||||||||| targets:165   AAGUUGUAGAUCGCGUCGAGGGCU   188 Target Full Sequence	1.5	Sequence 2322 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236327.1	ncRNA:24   UUCAACAUCUAGCACAGCUCCCGA   1   |||||||||||||*|||||||||| targets:165   AAGUUGUAGAUCGCGUCGAGGGCU   188 Target Full Sequence	1.5	Sequence 2322 from Patent EP2985353	NA	coding protein	psRNATarget
AK288437.1	ncRNA:24   UUCAACAUCUAGCACAGCUCCCGA   1   |||||||||=||*||||||||||| targets:1402   AAGUUGUAGGUCAUGUCGAGGGCU   1425 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034B12, full insert sequence	NA	coding protein	psRNATarget
JB164077.1	ncRNA:24   UUCAACAUCUAGCACAGCUCCCGA   1   ||||||||||*||*|||||||||| targets:167   AAGUUGUAGACCGCGUCGAGGGCU   190 Target Full Sequence	2.5	Sequence 1741 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235746.1	ncRNA:24   UUCAACAUCUAGCACAGCUCCCGA   1   ||||||||||*||*|||||||||| targets:167   AAGUUGUAGACCGCGUCGAGGGCU   190 Target Full Sequence	2.5	Sequence 1741 from Patent EP2985353	NA	coding protein	psRNATarget
HI403616.1	ncRNA:24   UUCAACAUCUAGCACAGCUCCCGA   1   ||||||||||*||*|||||||||| targets:167   AAGUUGUAGACCGCGUCGAGGGCU   190 Target Full Sequence	2.5	Sequence 1741 from Patent EP2074227	NA	coding protein	psRNATarget