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BaseInfo

ncRNA ID novel_osa_miR1526
Species Oryza sativa
Class miRNA
Genome position Chr12:4545390-4545459 [+]
Reference genome IRGSP-1.0
Source SRR1743000
Length 23
Mature sequence(if miRNA) 48 - UAAACUGAAAGAAACAGACAACU - 70
Stem-loop(if miRNA) ----UC             C   AAA   UU     C
      CUGUUUCUUUUAG UUG   UUA  AUAAU C
      ||||||||||||| |||   |||  |||||
      GACAAAGAAAGUC AAU   AAU  UAUUA A
UCAACA             A   GAG   --     G
Stem-loop sequence UCCUGUUUCUUUUAGCUUGAAAUUAUUAUAAUCCAGAUUAUUAAGAGUAAACUGAAAGAAACAGACAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288646.1
ncRNA:23   UCAACAGACAAAGAAAGUCAAAU   1
  |||||||||||||||||||*|||
targets:730   AGUUGUCUGUUUCUUUCAGCUUA   752

1.5 Oryza sativa Japonica Group cDNA, clone: J090056J01, full insert sequence NA coding protein psRNATarget