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BaseInfo

ncRNA ID	novel_osa_miR1525
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:8016909-8017061 [-]
Reference genome	IRGSP-1.0
Source	SRR1743000;SRR1743002;SRR2857736;SRR3123645;SRR5351739;SRR1738209;SRR1738226
Length	23
Mature sequence(if miRNA)	1 - UCAAGGAUCGUAAAAUUGCUCUU - 23
Stem-loop(if miRNA)	--U       C   A        ---                AAAAAAAUUAG      A           U          AGCAAUU UAC GUCCUUGA   GGUACCAUGAGGUACC           UGUAAA UUUGGUAUCUC UGGUACA    ||||||| ||| ||||||||   ||||||||||||||||           |||||| ||||||||||| ||||||U    UCGUUAA AUG UAGGAACU   CCAUGGUACUCCAUGG           ACAUUU AAACCAUGGAG AUCAUGG UUC       A   C        UCU                CAAAAAAGAUA      -           U
Stem-loop sequence	UAGCAAUUCUACAGUCCUUGAGGUACCAUGAGGUACCAAAAAAAUUAGUGUAAAAUUUGGUAUCUCUUGGUACAUGGUACUAUGAGGUACCAAAUUUACAAUAGAAAAAACGGUACCUCAUGGUACCUCUUCAAGGAUCGUAAAAUUGCUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015791346.1	ncRNA:23   UUCUCGUUAAAAUGCUAGGAACU   1   =||||=|||||||||=||||||| targets:2400   GAGAGUAAUUUUACGGUCCUUGA   2422 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cysteine-rich receptor-like protein kinase 10 (LOC4343479), mRNA	cysteine-rich receptor-like protein kinase 10(LOC4343479)	coding protein	psRNATarget
XM_015776452.1	ncRNA:23   UUCUCGUUAAAAUGCUAGGAACU   1   |||||*|||||||||||=||||| targets:428   AAGAGAAAUUUUACGAUUCUUGA   450 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333629 (LOC4333629), transcript variant X1, mRNA	uncharacterized LOC4333629(LOC4333629)	coding protein	psRNATarget
AK288305.1	ncRNA:23   UUCUCGUUAAAAUGCUAGGAACU   1   *||||*|||||||||=||||||| targets:3833   UAGAGGAAUUUUACGGUCCUUGA   3855 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090020F20, full insert sequence	NA	coding protein	psRNATarget