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BaseInfo

ncRNA ID	novel_osa_miR1518
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:13906116-13906200 [-]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	24
Mature sequence(if miRNA)	1 - GAAACAAUUCCGAUCUACUUGGUG - 24
Stem-loop(if miRNA)	--UG    -    -U      AU    U  UUUUAAAC       A     AGGU GAUU  AGUUGU  UUCA CU        GAUUGAA C     |||| ||||  ||||||  |||| ||        ||||||| A     UUCA CUAG  UUAACA  AAGU GA        CUAGCUU U GUGG    U    CC      --    -  ---UUCAU       U
Stem-loop sequence	UGAGGUGAUUUAGUUGUAUUUCAUCUUUUUAAACGAUUGAAACAUUUUCGAUCUACUUAGUGAAACAAUUCCGAUCUACUUGGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288014.1	ncRNA:24   GUGGUUCAUCUAGCCUUAACAAAG   1   |||||=|||*|||||||||||||| targets:3181   CACCAGGUAUAUCGGAAUUGUUUC   3204 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J075120L13, full insert sequence	NA	coding protein	psRNATarget
AK289141.1	ncRNA:24   GUGGUUCAUCUAGCCUUAACAAAG   1   |||||=|||*|||||||||||||| targets:2864   CACCAGGUAUAUCGGAAUUGUUUC   2887 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090099F05, full insert sequence	NA	coding protein	psRNATarget
AK288248.1	ncRNA:24   GUGGUUCAUCUAGCCUUAACAAAG   1   |||=|=|||*|||||||||||||| targets:1913   CACUAGGUAUAUCGGAAUUGUUUC   1936 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090014I17, full insert sequence	NA	coding protein	psRNATarget
AK107514.1	ncRNA:24   GUGGUUCAUCUAGCCUUAACAAAG   1   |*|||=|||*|||||||||||||| targets:1198   CCCCAGGUAUAUCGGAAUUGUUUC   1221 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-129-F02, full insert sequence	NA	coding protein	psRNATarget