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BaseInfo

ncRNA ID	novel_osa_miR1514
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:27811240-27811397 [-]
Reference genome	IRGSP-1.0
Source	SRR1743000;SRR2098557
Length	21
Mature sequence(if miRNA)	138 - UACCAACGUUUGACUGUCCGU - 158
Stem-loop(if miRNA)	-UA    C          C        A     UUUUU      ---UUA    UUUCAUUGUAUUUAGAUGAUAAAACAU    CCAA GUUUGACUGU CGUCUUAU UGAAA     UUAUAA      GUAU                           G    |||| |||||||||| |||||||| |||||     ||||||      ||||    GGUU CAAACUGGCA GCAGAAUA ACUUU     AAUAUU      AAUU                           A ACA    A          A        A     --UUU      UUUUUU    UUUCUAUUCAGUGCGUAUUUCAUAAUU
Stem-loop sequence	UACCAACGUUUGACUGUCCGUCUUAUAUGAAAUUUUUUUAUAAUUAGUAUUUUCAUUGUAUUUAGAUGAUAAAACAUGAUUAAUACUUUAUGCGUGACUUAUCUUUUUAAUUUUUUUUAUAAUUUUUUCAAAUAAGACGAACGGUCAAACAUUGGACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288770.1	ncRNA:21   UGCCUGUCAGUUUGCAACCAU   1   |||||||||||||||||||*| targets:2448   ACGGACAGUCAAACGUUGGCA   2468 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090067O18, full insert sequence	NA	coding protein	psRNATarget
XM_015781390.1	ncRNA:21   UGCCUGUCAGUUUGCAACCAU   1   |||||==|||||||||||||* targets:1438   ACGGAUGGUCAAACGUUGGUC   1458 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336685 (LOC4336685), transcript variant X2, mRNA	uncharacterized LOC4336685(LOC4336685)	coding protein	psRNATarget
XM_015781389.1	ncRNA:21   UGCCUGUCAGUUUGCAACCAU   1   |||||==|||||||||||||* targets:1438   ACGGAUGGUCAAACGUUGGUC   1458 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336685 (LOC4336685), transcript variant X1, mRNA	uncharacterized LOC4336685(LOC4336685)	coding protein	psRNATarget
AK288529.1	ncRNA:21   UGCCUGUCAGUUUGCAACCAU   1   |=|||||||||||||||||*| targets:213   AUGGACAGUCAAACGUUGGCA   233 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090044M17, full insert sequence	NA	coding protein	psRNATarget
HI404014.1	ncRNA:21   UGCCUGUCAGUUUGCAACCAU   1   |=|*|=||||||||||||||* targets:172   AUGAAUAGUCAAACGUUGGUC   192 Target Full Sequence	3.0	Sequence 2139 from Patent EP2074227	NA	coding protein	psRNATarget
JB164475.1	ncRNA:21   UGCCUGUCAGUUUGCAACCAU   1   |=|*|=||||||||||||||* targets:172   AUGAAUAGUCAAACGUUGGUC   192 Target Full Sequence	3.0	Sequence 2139 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236144.1	ncRNA:21   UGCCUGUCAGUUUGCAACCAU   1   |=|*|=||||||||||||||* targets:172   AUGAAUAGUCAAACGUUGGUC   192 Target Full Sequence	3.0	Sequence 2139 from Patent EP2985353	NA	coding protein	psRNATarget