ncRNA ID | novel_osa_miR1509 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:26063355-26063438 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743000 |
Length | 23 |
Mature sequence(if miRNA) | 62 - UUAAGGAGCCGUAUGUGAAAAUG - 84 |
Stem-loop(if miRNA) |
--    UG        C           CU     UG    U   UUUU  CAUGUGGC CCUUAAGAGGC  GUAUG  AAAA C   ||||  |||||||| |||||||||||  |||||  ||||   AAAA  GUAUGCCG GGAAUUCUCUG  UGUAC  UUUU G GU    GU        A           AG     GU    A |
Stem-loop sequence | UUUUUGCAUGUGGCCCCUUAAGAGGCCUGUAUGUGAAAAUCGAUUUUUGCAUGUGAGUCUCUUAAGGAGCCGUAUGUGAAAAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288665.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090058G11, full insert sequence | NA | coding protein | psRNATarget |