ncRNA ID | novel_osa_miR1508 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:25764297-25764360 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743000;SRR1555746;SRR1555747;SRR2040401;SRR1556014;SRR4407954;SRR4407958;SRR1556020;SRR1654490 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGACUACUGUAGCGGGCCGGCAC - 24 |
Stem-loop(if miRNA) |
--AC A    U  A        -  A  -  A       G CUAC GU GCGGGCCG GC CG GC CGG     | |||| || |||||||| || || || ||C     C GAUG CA CGCCCGGC CG GC CG GCC CGUA -    U  A        A  -  G  -   |
Stem-loop sequence | ACGACUACUGUAGCGGGCCGGCACGGCACGGCCCGGCGCGGCACGGCCCGCAACUGUAGCAUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK289003.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090088N18, full insert sequence | NA | coding protein | psRNATarget |