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BaseInfo

ncRNA ID novel_osa_miR1508
Species Oryza sativa
Class miRNA
Genome position Chr11:25764297-25764360 [+]
Reference genome IRGSP-1.0
Source SRR1743000;SRR1555746;SRR1555747;SRR2040401;SRR1556014;SRR4407954;SRR4407958;SRR1556020;SRR1654490
Length 24
Mature sequence(if miRNA) 1 - ACGACUACUGUAGCGGGCCGGCAC - 24
Stem-loop(if miRNA) --AC A    U  A        -  A  -  A  
    G CUAC GU GCGGGCCG GC CG GC CGG
    | |||| || |||||||| || || || ||C
    C GAUG CA CGCCCGGC CG GC CG GCC
CGUA -    U  A        A  -  G  -  
Stem-loop sequence ACGACUACUGUAGCGGGCCGGCACGGCACGGCCCGGCGCGGCACGGCCCGCAACUGUAGCAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289003.1
ncRNA:24   CACG-GCCGGGCGAUGUCAUCAGCA   1
  **||-|||||||||||||*||||||
targets:1763   CGGCACGGCCCGCUACAGGAGUCGU   1787

1.5 Oryza sativa Japonica Group cDNA, clone: J090088N18, full insert sequence NA coding protein psRNATarget