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BaseInfo

ncRNA ID novel_osa_miR1503
Species Oryza sativa
Class miRNA
Genome position Chr11:24088886-24089102 [+]
Reference genome IRGSP-1.0
Source SRR1743000;SRR4407954;SRR4407960;SRR4407961;SRR1738224
Length 24
Mature sequence(if miRNA) 194 - CUUGGAACUCACACUUAUCGAUGG - 217
Stem-loop(if miRNA) --     C               A     G                      C        C   A                       C          U    A AA
  AUCGA AAGUGUGAGUUCCAA AAAUG CAUCGUACAAAUGAUUUUGUCC AAAAAUAC AUC CCGUUAGGGUUCCGUCCAUUCCG GCUGUUAAGU AUAU G  U
  ||||| ||||||||||||||| ||||| |||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||||||| |||| |
  UAGCU UUCACACUCAAGGUU UUUAC GUAGCAUGUUUGCUAAAAUAGG UUUUUAUG UAG GGCAAUCCCAAGGCAGGUAAGGC CGGCAAUUUA UGUG C  G
GG     A               C     G                      A        A   C                       A          -    A AA
Stem-loop sequence AUCGACAAGUGUGAGUUCCAAAAAAUGGCAUCGUACAAAUGAUUUUGUCCCAAAAAUACCAUCACCGUUAGGGUUCCGUCCAUUCCGCGCUGUUAAGUUAUAUAGAAUGAACAGUGUAUUUAACGGCACGGAAUGGACGGAACCCUAACGGCGAUAGUAUUUUUAGGAUAAAAUCGUUUGUACGAUGGCAUUUCUUGGAACUCACACUUAUCGAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015763566.1
ncRNA:24   GGUAGCUAUUCACACUCAAGGUUC   1
  ||||=||*||||||||||||||||
targets:3475   CCAUUGACAAGUGUGAGUUCCAAG   3498

1.0 PREDICTED: Oryza sativa Japonica Group receptor-like protein 12 (LOC107276166), mRNA receptor-like protein 12(LOC107276166) coding protein psRNATarget