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BaseInfo

ncRNA ID	novel_osa_miR1500
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:22775715-22775811 [+]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	21
Mature sequence(if miRNA)	1 - CAGCCACACACAUGAUAUGAC - 21
Stem-loop(if miRNA)	--                     A              UGACA    UU   CAGCCACACACAUGAUAUGAC UUUCUACCCCUCAU     UGCA  A   ||||||||||||||||||||| ||||||||||||||     ||||  U   GUCGGUGUGUGUGCUAUACUG AAAGAUGGGGAGUG     AUGU  A AG                     C              --UUC    UC
Stem-loop sequence	CAGCCACACACAUGAUAUGACAUUUCUACCCCUCAUUGACAUGCAUUAUACUUGUACUUGUGAGGGGUAGAAACGUCAUAUCGUGUGUGUGGCUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015772668.1	ncRNA:21   CAGUAUAGUACACACACCGAC   1   ||||||||=|||||||||||| targets:1113   GUCAUAUCGUGUGUGUGGCUG   1133 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group mitotic-spindle organizing protein 1B-like (LOC107277991), mRNA	mitotic-spindle organizing protein 1B-like(LOC107277991)	coding protein	psRNATarget
XM_015759864.1	ncRNA:21   CAGUAUAGUACACACACCGAC   1   ||||||||=|||||||||||| targets:1113   GUCAUAUCGUGUGUGUGGCUG   1133 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group mitotic-spindle organizing protein 1B (LOC4333190), mRNA	mitotic-spindle organizing protein 1B(LOC4333190)	coding protein	psRNATarget
LQ236369.1	ncRNA:21   CAGUAUAGUACACACACCGAC   1   ||||||||*|||||||||||* targets:82   GUCAUAUCCUGUGUGUGGCUU   102 Target Full Sequence	2.5	Sequence 2364 from Patent EP2985353	NA	coding protein	psRNATarget
JB164700.1	ncRNA:21   CAGUAUAGUACACACACCGAC   1   ||||||||*|||||||||||* targets:82   GUCAUAUCCUGUGUGUGGCUU   102 Target Full Sequence	2.5	Sequence 2364 from Patent EP2559767	NA	coding protein	psRNATarget
HI404239.1	ncRNA:21   CAGUAUAGUACACACACCGAC   1   ||||||||*|||||||||||* targets:82   GUCAUAUCCUGUGUGUGGCUU   102 Target Full Sequence	2.5	Sequence 2364 from Patent EP2074227	NA	coding protein	psRNATarget