| ncRNA ID | novel_osa_miR1496 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr1:21643602-21643768 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1743000;SRR2040399;SRR3123651;SRR1738240 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGUUUUUGUUUGCAUUGUUUGACC - 24 |
| Stem-loop(if miRNA) |
UUAAAC UG --UA ---UUG AUA ---U A A GUAC ----------- A AAG GU GACA AAACA UAAAAUU UUUAU UA GAUG AGGGA UAUCUA GUAGUAC GGAU A || |||| ||||| ||||||| ||||| || |||| ||||| |||||| ||||||| |||| CA UUGU UUUGU GUUUUAG GAAUA AU CUGC UCCUU AUAGAU UAUCAUG CCUA U -----C GU UACG UUUUGA --G UAAU C C ---A AUAAGUAUAAG G CUA |
| Stem-loop sequence | UUAAACGUUGGACAUAAAACAUUGUAAAAUUAUAUUUAUUUAAGAUGAAGGGAGUACUAUCUAGUAGUACAGGAUAAGAUAUCAUCCGGUACUAUGAAUAUGAAUAUAGAUAAUUCCUCCGUCCUAUAAUAUAAGGGAUUUUGAGUUUUUGUUUGCAUUGUUUGACC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CT837708.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA220M04, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK288977.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090085K17, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK288846.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090075E22, full insert sequence | NA | coding protein | psRNATarget |