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BaseInfo

ncRNA ID	novel_osa_miR1494
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:21009755-21009823 [+]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	24
Mature sequence(if miRNA)	46 - AUAUCCAACGAUCGAAAACGAUUU - 69
Stem-loop(if miRNA)	--       C            ----  -AA   UAA   AUCGUUU CGAUCGUUGGAU    CU   CAA   C   ||||||| ||||||||||||    ||   |||   UAGCAAA GCUAGCAACCUA    GA   GUU   A UU       A            UAUC  CUC   UUA
Stem-loop sequence	AUCGUUUCCGAUCGUUGGAUCUAACAAUAACAAUUUUGCUCAGCUAUAUCCAACGAUCGAAAACGAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779655.1	ncRNA:24   UUUAGCAAAAGCUAGCAACCUAUA   1   ||||||||||||||||||||||*| targets:1507   AAAUCGUUUUCGAUCGUUGGAUCU   1530 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280684 (LOC107280684), transcript variant X1, mRNA	uncharacterized LOC107280684(LOC107280684)	coding protein	psRNATarget
XM_015779276.1	ncRNA:24   UUUAGCAAAAGCUAGCAACCUAUA   1   ||||=|||||||||||||||||*| targets:1701   AAAUUGUUUUCGAUCGUUGGAUCU   1724 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266029 (LOC9266029), transcript variant X1, mRNA	uncharacterized LOC9266029(LOC9266029)	coding protein	psRNATarget
XM_015779283.1	ncRNA:24   UUUAGCAAAAGCUAGCAACCUAUA   1   ||||=|||||||||||||||||*| targets:1694   AAAUUGUUUUCGAUCGUUGGAUCU   1717 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266029 (LOC9266029), transcript variant X2, mRNA	uncharacterized LOC9266029(LOC9266029)	coding protein	psRNATarget
XM_015779289.1	ncRNA:24   UUUAGCAAAAGCUAGCAACCUAUA   1   ||||=|||||||||||||||||*| targets:1503   AAAUUGUUUUCGAUCGUUGGAUCU   1526 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266029 (LOC9266029), transcript variant X3, mRNA	uncharacterized LOC9266029(LOC9266029)	coding protein	psRNATarget
AK288876.1	ncRNA:24   UUUAGCAAAAGCUAGCAACCUAUA   1   |||||*||||||||||||||||*| targets:243   AAAUCAUUUUCGAUCGUUGGAUCU   266 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090078P15, full insert sequence	NA	coding protein	psRNATarget
AK240791.1	ncRNA:24   UUUAGCAAAAGCUAGCAACCUAUA   1   ||||=||||*||||||||||||*| targets:174   AAAUUGUUUCCGAUCGUUGGAUCU   197 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
AK287529.1	ncRNA:24   UUUAGCAAAAGCUAGCAACCUAUA   1   ||||=||||*||||||||||||*| targets:174   AAAUUGUUUCCGAUCGUUGGAUCU   197 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
XM_015786123.1	ncRNA:24   UUUAGCAAAAGCUAGCAACCUAUA   1   ||||=||||*||||||||||||*| targets:663   AAAUUGUUUCCGAUCGUUGGAUCU   686 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340617 (LOC4340617), mRNA	uncharacterized LOC4340617(LOC4340617)	coding protein	psRNATarget