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BaseInfo

ncRNA ID	novel_osa_miR1487
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:18927794-18927899 [+]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	24
Mature sequence(if miRNA)	83 - AACGUGAGAAAUACUAGAAUGACU - 106
Stem-loop(if miRNA)	--         C    UC   A        A                   GAU   UCAUUUUAG AUUU  CAC UUCAUAUU AUGUUGAUGAAUCUAGAUA   A   ||||||||| ||||  ||| |||||||| |||||||||||||||||||   AGUAAGAUC UAAA  GUG AAGUAUAA UACAAUUACUUAGAUCUGU   U UC         A    GA   C        C                   AUA
Stem-loop sequence	UCAUUUUAGCAUUUUCCACAUUCAUAUUAAUGUUGAUGAAUCUAGAUAGAUAUAUAUGUCUAGAUUCAUUAACAUCAAUAUGAACGUGAGAAAUACUAGAAUGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288952.1	ncRNA:24   UCAGUAAGAUCAUAAAGAGUGCAA   1   |||||||||||||||||||||*|| targets:258   AGUCAUUCUAGUAUUUCUCACAUU   281 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090083K12, full insert sequence	NA	coding protein	psRNATarget
AK070012.1	ncRNA:24   UCAGUAAGAUCAUAAAGAGUGCAA   1   |||||||||||||||||||||*|| targets:2339   AGUCAUUCUAGUAUUUCUCACAUU   2362 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023037B16, full insert sequence	NA	coding protein	psRNATarget
XM_015770158.1	ncRNA:24   UCAGUAAGAUCAUAAAGAGUGCAA   1   |||==||*|||||||||||||*|| targets:4108   AGUUGUUAUAGUAUUUCUCACAUU   4131 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group RING-H2 finger protein ATL3 (LOC4331022), transcript variant X2, mRNA	RING-H2 finger protein ATL3(LOC4331022)	coding protein	psRNATarget
XM_015770157.1	ncRNA:24   UCAGUAAGAUCAUAAAGAGUGCAA   1   |||==||*|||||||||||||*|| targets:4108   AGUUGUUAUAGUAUUUCUCACAUU   4131 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group RING-H2 finger protein ATL3 (LOC4331022), transcript variant X1, mRNA	RING-H2 finger protein ATL3(LOC4331022)	coding protein	psRNATarget
AK061459.1	ncRNA:24   UCAGUAAGAUCAUAAAGAGUGCAA   1   |||==||*|||||||||||||*|| targets:1314   AGUUGUUAUAGUAUUUCUCACAUU   1337 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-308-A03, full insert sequence	NA	coding protein	psRNATarget