| ncRNA ID | novel_osa_miR1480 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr1:40733874-40734041 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1555746;SRR1556014 |
| Length | 23 |
| Mature sequence(if miRNA) | 146 - UUUUUUCCAACGUUUGACCAUUC - 168 |
| Stem-loop(if miRNA) |
---- UU C A A -A UU -UAUU - AA UUCGUUAU UUUU CCAACGUUUGACCAUU GU UUAUUCAAAA UUU UGUA UAU UAUUU UAUUAU CUUGA C |||| |||||||||||||||| || |||||||||| ||| |||| ||| ||||| |||||| ||||| AAAG GGUUGCAAAUUGGUAA CA AAUAAGUUUU AAA ACGU AUA AUAAA AUAGUA GAAUU A CUAA CU A A A AC UU CUUUU U -C UCUUAUAA |
| Stem-loop sequence | UUUUUUCCAACGUUUGACCAUUCGUAUUAUUCAAAAAUUUAUGUAUUUAUUAUUUAUUUUAUUAUAACUUGAUUCGUUAUCAAAUAUUCUUUAAGCAUGAUAUAAAUAUUUUCAUAUUUGCACAAAAAUUUUGAAUAAAACAAAUGGUUAAACGUUGGUCGAAAAAUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK288628.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J090054O04, full insert sequence | NA | coding protein | psRNATarget |