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BaseInfo

ncRNA ID novel_osa_miR1478
Species Oryza sativa
Class miRNA
Genome position Chr11:15766395-15766577 [+]
Reference genome IRGSP-1.0
Source SRR1743000;SRR1743006;SRR1738227
Length 20
Mature sequence(if miRNA) 1 - UCAUGUACAUUACCAGGACU - 20
Stem-loop(if miRNA) --U           C    A                        A       -      G  A              -C   CUUAUGUUGU
   CAUGUACAUUA CAGG CUUUUCAAGUUUUACCAACAAGUG GGUUUUG AAAAGA CU UUUGAUUUUACUUU  CGG          U
   ||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||| || ||||||||||||||  |||          G
   GUACAUGUAAU GUCC GAAAAGUUCAGAAUGGUUGUUCAC CCAAAGC UUUUUU GA AAACUAAAAUGAAA  ACU          A
CCU           U    C                        C       C      A  C              AU   CUUCUUCUUC
Stem-loop sequence UCAUGUACAUUACCAGGACUUUUCAAGUUUUACCAACAAGUGAGGUUUUGAAAAGAGCUAUUUGAUUUUACUUUCCGGCUUAUGUUGUUGACUUCUUCUUCUCAUAAAAGUAAAAUCAAACAGAUUUUUUCCGAAACCCCACUUGUUGGUAAGACUUGAAAAGCCCUGUUAAUGUACAUGUCC