ncRNA ID | novel_osa_miR1478 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:15766395-15766577 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743000;SRR1743006;SRR1738227 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UCAUGUACAUUACCAGGACU - 20 |
Stem-loop(if miRNA) |
--U           C    A                        A       -      G  A              -C   CUUAUGUUGU    CAUGUACAUUA CAGG CUUUUCAAGUUUUACCAACAAGUG GGUUUUG AAAAGA CU UUUGAUUUUACUUU  CGG          U    ||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||| || ||||||||||||||  |||          G    GUACAUGUAAU GUCC GAAAAGUUCAGAAUGGUUGUUCAC CCAAAGC UUUUUU GA AAACUAAAAUGAAA  ACU          A CCU           U    C                        C       C      A  C              AU   CUUCUUCUUC |
Stem-loop sequence | UCAUGUACAUUACCAGGACUUUUCAAGUUUUACCAACAAGUGAGGUUUUGAAAAGAGCUAUUUGAUUUUACUUUCCGGCUUAUGUUGUUGACUUCUUCUUCUCAUAAAAGUAAAAUCAAACAGAUUUUUUCCGAAACCCCACUUGUUGGUAAGACUUGAAAAGCCCUGUUAAUGUACAUGUCC |