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BaseInfo

ncRNA ID	novel_osa_miR1472
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:31400427-31400515 [-]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	24
Mature sequence(if miRNA)	66 - AGUUUGAGAUAUGUCAUCGGUAUC - 89
Stem-loop(if miRNA)	--                  GGUA  UCAAUGACAUGUGGGACCC   AGUUUGAGAUAUGUCAUC    UC                   A   ||||||||||||||||||    ||                   C   UUAAACUCUAUACGGUAG    CU                   A UU                  --GA  GGGUGUACAGUAACUGAGU
Stem-loop sequence	AGUUUGAGAUAUGUCAUCGGUAUCUCAAUGACAUGUGGGACCCACAUGAGUCAAUGACAUGUGGGUCAGGAUGGCAUAUCUCAAAUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015759579.1	ncRNA:24   CUAUGGCUACUGUAUAGAGUUUGA   1   ||||||||||=||||||||||||| targets:3614   GAUACCGAUGGCAUAUCUCAAACU   3637 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable disease resistance protein At1g58602 (LOC4348212), transcript variant X2, mRNA	probable disease resistance protein At1g58602(LOC4348212)	coding protein	psRNATarget
XM_015759577.1	ncRNA:24   CUAUGGCUACUGUAUAGAGUUUGA   1   ||||||||||=||||||||||||| targets:3633   GAUACCGAUGGCAUAUCUCAAACU   3656 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable disease resistance protein At1g58602 (LOC4348212), transcript variant X1, mRNA	probable disease resistance protein At1g58602(LOC4348212)	coding protein	psRNATarget
XM_015759581.1	ncRNA:24   CUAUGGCUACUGUAUAGAGUUUGA   1   ||||||||||=||||||||||||| targets:3786   GAUACCGAUGGCAUAUCUCAAACU   3809 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable disease resistance protein At1g58602 (LOC4348212), transcript variant X4, mRNA	probable disease resistance protein At1g58602(LOC4348212)	coding protein	psRNATarget
XM_015759580.1	ncRNA:24   CUAUGGCUACUGUAUAGAGUUUGA   1   ||||||||||=||||||||||||| targets:3791   GAUACCGAUGGCAUAUCUCAAACU   3814 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable disease resistance protein At1g58602 (LOC4348212), transcript variant X3, mRNA	probable disease resistance protein At1g58602(LOC4348212)	coding protein	psRNATarget
XM_015759582.1	ncRNA:24   CUAUGGCUACUGUAUAGAGUUUGA   1   ||||||||||=||||||||||||| targets:3809   GAUACCGAUGGCAUAUCUCAAACU   3832 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable disease resistance protein At1g58602 (LOC4348212), transcript variant X5, mRNA	probable disease resistance protein At1g58602(LOC4348212)	coding protein	psRNATarget
XM_015763672.1	ncRNA:24   CUAUGGCUACUGUAUAGAGUUUGA   1   |||=||||||=||||||||||||| targets:2250   GAUGCCGAUGGCAUAUCUCAAACU   2273 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group proline-rich receptor-like protein kinase PERK7 (LOC107275798), partial mRNA	proline-rich receptor-like protein kinase PERK7(LOC107275798)	coding protein	psRNATarget
XM_015770681.1	ncRNA:24   CUAUGGCUACUGUAUAGAGUUUGA   1   ||||||||||==|||||||||||| targets:1331   GAUACCGAUGGUAUAUCUCAAACU   1354 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group urease accessory protein F (LOC4328424), transcript variant X3, mRNA	urease accessory protein F(LOC4328424)	coding protein	psRNATarget
XM_015770680.1	ncRNA:24   CUAUGGCUACUGUAUAGAGUUUGA   1   ||||||||||==|||||||||||| targets:1342   GAUACCGAUGGUAUAUCUCAAACU   1365 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group urease accessory protein F (LOC4328424), transcript variant X2, mRNA	urease accessory protein F(LOC4328424)	coding protein	psRNATarget
XM_015770678.1	ncRNA:24   CUAUGGCUACUGUAUAGAGUUUGA   1   ||||||||||==|||||||||||| targets:1333   GAUACCGAUGGUAUAUCUCAAACU   1356 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group urease accessory protein F (LOC4328424), transcript variant X1, mRNA	urease accessory protein F(LOC4328424)	coding protein	psRNATarget