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BaseInfo

ncRNA ID novel_osa_miR1450
Species Oryza sativa
Class miRNA
Genome position Chr11:9033887-9034027 [+]
Reference genome IRGSP-1.0
Source SRR1743000
Length 24
Mature sequence(if miRNA) 118 - AUGUGAACAAUGAUAGAAAAUCUU - 141
Stem-loop(if miRNA) --  C      A      -                             -    U ---  UAUAUAUUAAUGA
  GA UUUCUA CGUUGU CACAUUCAUAUAGAUGUUAAUGAAUCUUG CAUU A   UA             A
  || |||||| |||||| ||||||||||||||||||||||||||||| |||| |   ||             U
  CU AAAGAU GUAACA GUGUAAGUAUAUCUACAAUUACUUAGAAU UUGG A   CU             C
UU  A      A      A                             A    - UAU  ACAAGUGUAAGUU
Stem-loop sequence GACUUUCUAACGUUGUCACAUUCAUAUAGAUGUUAAUGAAUCUUGCAUUUAUAUAUAUAUUAAUGAAUCUUGAAUGUGAACAUCUAUAGGUUAUAAGAUUCAUUAACAUCUAUAUGAAUGUGAACAAUGAUAGAAAAUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK242012.1
ncRNA:24   UUCUAAAAGAUAGUAACAAGUGUA   1
  ||||*|||||||||||||*|||||
targets:712   AAGACUUUCUAUCAUUGUCCACAU   735

1.5 Oryza sativa Japonica Group cDNA, clone: J075106H22, full insert sequence NA coding protein psRNATarget