Search result

BaseInfo

ncRNA ID novel_osa_miR1442
Species Oryza sativa
Class miRNA
Genome position Chr9:1754079-1754164 [+]
Reference genome IRGSP-1.0
Source SRR1743000;SRR1738227
Length 24
Mature sequence(if miRNA) 63 - AUACGCGACUGAGCCGGCGAGCCU - 86
Stem-loop(if miRNA) ---GA     U   UG     U CG   U   AG        CCG
     UGCUG GCU  GUUGC G  UGC GCU  UUGUUGGG   G
     ||||| |||  ||||| |  ||| |||  ||||||||
     GCGGC CGA  CAGCG C  ACG CGA  GACGACCC   C
UCCGA     -   GU     - AU   C   -A        CUG
Stem-loop sequence GAUGCUGUGCUUGGUUGCUGCGUGCUGCUAGUUGUUGGGCCGGCGUCCCCAGCAGAAGCCGCAUACGCGACUGAGCCGGCGAGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015773244.1
ncRNA:24   UCCGAGCGGCCGAGUCAGCGCAUA   1
  ||||||||||||||||||||||||
targets:613   AGGCUCGCCGGCUCAGUCGCGUAU   636

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333552 (LOC4333552), mRNA uncharacterized LOC4333552(LOC4333552) coding protein psRNATarget