ncRNA ID | novel_osa_miR1442 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:1754079-1754164 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743000;SRR1738227 |
Length | 24 |
Mature sequence(if miRNA) | 63 - AUACGCGACUGAGCCGGCGAGCCU - 86 |
Stem-loop(if miRNA) |
---GA     U   UG     U CG   U   AG        CCG      UGCUG GCU  GUUGC G  UGC GCU  UUGUUGGG   G      ||||| |||  ||||| |  ||| |||  ||||||||      GCGGC CGA  CAGCG C  ACG CGA  GACGACCC   C UCCGA     -   GU     - AU   C   -A        CUG |
Stem-loop sequence | GAUGCUGUGCUUGGUUGCUGCGUGCUGCUAGUUGUUGGGCCGGCGUCCCCAGCAGAAGCCGCAUACGCGACUGAGCCGGCGAGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015773244.1 |
|
0.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333552 (LOC4333552), mRNA | uncharacterized LOC4333552(LOC4333552) | coding protein | psRNATarget |