Search result

BaseInfo

ncRNA ID	novel_osa_miR1432
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:21601104-21601170 [+]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	24
Mature sequence(if miRNA)	44 - AUUUUAGGACUUACAUUGUAAAUA - 67
Stem-loop(if miRNA)	--      U      -        C         U   UUUACA AUGUAA UUUUAAGA UUACAUAUG A   |||||| |||||| |||||||| |||||||||   AAAUGU UACAUU AGGAUUUU AAUGUAUAU A AU      -      C        -         U
Stem-loop sequence	UUUACAUAUGUAAUUUUAAGACUUACAUAUGUAAUUAUAUGUAAUUUUAGGACUUACAUUGUAAAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289029.1	ncRNA:24   AUAAAUGUUACAUUCAGGAUUUUA   1   |||||||=||||||||||*||||| targets:1132   UAUUUACGAUGUAAGUCCCAAAAU   1155 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090090O22, full insert sequence	NA	coding protein	psRNATarget
XM_015772487.1	ncRNA:24   AUAAAUGUUACAUUCAGGAUUUUA   1   ||||||||||*||||||*|||||| targets:1801   UAUUUACAAUAUAAGUCAUAAAAU   1824 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group anthocyanin 3'-O-beta-glucosyltransferase (LOC4326578), mRNA	anthocyanin 3'-O-beta-glucosyltransferase(LOC4326578)	coding protein	psRNATarget
AK103824.1	ncRNA:24   AUAAAUGUUACAUUCAGGAUUUUA   1   ||||||||||*||||||*|||||| targets:1784   UAUUUACAAUAUAAGUCAUAAAAU   1807 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033147K24, full insert sequence	NA	coding protein	psRNATarget
AK101659.1	ncRNA:24   AUAAAUGUUACAUUCAGGAUUUUA   1   ||||||||||*||||||*|||||| targets:1784   UAUUUACAAUAUAAGUCAUAAAAU   1807 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033057I21, full insert sequence	NA	coding protein	psRNATarget
AK288920.1	ncRNA:24   AUAAAUGUUACAUUCAGGAUUUUA   1   ***|*|||||||=||||||||||* targets:134   CCCUCACAAUGUGAGUCCUAAAAA   157 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090081L22, full insert sequence	NA	coding protein	psRNATarget