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BaseInfo

ncRNA ID	novel_osa_miR1426
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:23048184-23048313 [+]
Reference genome	IRGSP-1.0
Source	SRR1743000;SRR3123630;SRR1738225
Length	24
Mature sequence(if miRNA)	1 - ACCUUCGUUUCAGAUUAUAAGACU - 24
Stem-loop(if miRNA)	--A                        CCUAGUAUUGC       A              G      UUU    CCUUCGUUUCAGAUUAUAAGACUU           CCACAUU AUAUAGAUGUUAAU AAUCUA   G    ||||||||||||||||||||||||           ||||||| |||||||||||||| ||||||    GGAGGUAAAGUCUAAUGUUCUGAA           GGUGUAA UAUAUUUACAAUUA UUAGAU   U GAA                        ----------A       G              A      CUG
Stem-loop sequence	ACCUUCGUUUCAGAUUAUAAGACUUCCUAGUAUUGCCCACAUUAAUAUAGAUGUUAAUGAAUCUAUUUGUGUCUAGAUUAAUUAACAUUUAUAUGAAUGUGGAAAGUCUUGUAAUCUGAAAUGGAGGAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288568.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   |||||||||||||||||=|||||| targets:1485   AGUCUUAUAAUCUGAAAUGAAGGU   1508 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence	NA	coding protein	psRNATarget
XM_015769902.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   |||=|||||||||||||||=|||| targets:1268   AGUUUUAUAAUCUGAAACGGAGGU   1291 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group putative methyltransferase DDB_G0268948 (LOC107278642), mRNA	putative methyltransferase DDB_G0268948(LOC107278642)	coding protein	psRNATarget
XM_015764678.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   ||||||||||*||||||||=|||| targets:1703   AGUCUUAUAACCUGAAACGGAGGU   1726 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group mannan endo-1,4-beta-mannosidase 8 (LOC9271116), mRNA	mannan endo-1,4-beta-mannosidase 8(LOC9271116)	coding protein	psRNATarget
AK120530.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   ||||||||||*||||||||=|||| targets:1909   AGUCUUAUAACCUGAAACGGAGGU   1932 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013127H10, full insert sequence	NA	coding protein	psRNATarget
AK070816.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   ||||||||||*||||||||=|||| targets:1375   AGUCUUAUAAGCUGAAACGGAGGU   1398 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023066M01, full insert sequence	NA	coding protein	psRNATarget
AK288527.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   *||||||||||||||||||=|||* targets:787   CGUCUUAUAAUCUGAAACGGAGGG   810 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090044J18, full insert sequence	NA	coding protein	psRNATarget
AK067363.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   |||||||||||*|||||||||||* targets:1066   AGUCUUAUAAUAUGAAACGAAGGA   1089 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013100G02, full insert sequence	NA	coding protein	psRNATarget
AK288928.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   *|||||||||*||||||||=|||| targets:1420   CGUCUUAUAACCUGAAACGGAGGU   1443 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090082F16, full insert sequence	NA	coding protein	psRNATarget
XM_015769449.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   ||*|||*||||||||||||=|||| targets:186   AGCCUUCUAAUCUGAAACGGAGGU   209 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group ethylene-responsive transcription factor ERF018-like (LOC107278604), mRNA	ethylene-responsive transcription factor ERF018-like(LOC107278604)	coding protein	psRNATarget
AK288396.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   *|*=|||||||||||||||=|||* targets:608   CGAUUUAUAAUCUGAAACGGAGGG   631 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090027N23, full insert sequence	NA	coding protein	psRNATarget
AK071758.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   ***|||||||*||||||||=|||| targets:1142   CCCCUUAUAACCUGAAACGGAGGU   1165 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023112J01, full insert sequence	NA	coding protein	psRNATarget
XM_015792379.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   ***|||||||*||||||||=|||| targets:1154   CCCCUUAUAACCUGAAACGGAGGU   1177 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein At4g14100 (LOC4342613), mRNA	uncharacterized protein At4g14100(LOC4342613)	coding protein	psRNATarget
XM_015771202.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   *|*||||||*|*|||||||||||| targets:113   CGACUUAUAUUAUGAAACGAAGGU   136 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278672 (LOC107278672), transcript variant X1, mRNA	uncharacterized LOC107278672(LOC107278672)	coding protein	psRNATarget
XM_015771203.1	ncRNA:24   UCAGAAUAUUAGACUUUGCUUCCA   1   *|*||||||*|*|||||||||||| targets:113   CGACUUAUAUUAUGAAACGAAGGU   136 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278672 (LOC107278672), transcript variant X2, mRNA	uncharacterized LOC107278672(LOC107278672)	coding protein	psRNATarget