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BaseInfo

ncRNA ID	novel_osa_miR1424
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:21133076-21133217 [+]
Reference genome	IRGSP-1.0
Source	SRR1743000
Length	21
Mature sequence(if miRNA)	122 - UCAAGGACCGUAAAAUUACUC - 142
Stem-loop(if miRNA)	--GC        A  G            C      ---    CAAAAA    A      A    G     CAUA     AAUUUUAC GU CUUGAGGAGGUU CAUGAG   UUAC      UUUA UGUAAA UUUG UACCU    U     |||||||| || |||||||||||| ||||||   ||||      |||| |||||| |||| |||||     UUAAAAUG CA GAACUUCUCUAA GUACUC   AAUG      AGAU ACAUUU AAAC AUGGA    U CUCA        C  G            U      CAA    --AAAA    A      -    A     UCCA
Stem-loop sequence	GCAAUUUUACAGUGCUUGAGGAGGUUCCAUGAGUUACCAAAAAUUUAAUGUAAAAUUUGGUACCUCAUAUUACCUAGGUAACAAAUUUACAAUAGAAAAAGUAAAACCUCAUGUAAUCUCUUCAAGGACCGUAAAAUUACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015791346.1	ncRNA:21   CUCAUUAAAAUGCCAGGAACU   1   ||||||||||||||||||||| targets:2402   GAGUAAUUUUACGGUCCUUGA   2422 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group cysteine-rich receptor-like protein kinase 10 (LOC4343479), mRNA	cysteine-rich receptor-like protein kinase 10(LOC4343479)	coding protein	psRNATarget
AK288305.1	ncRNA:21   CUCAUUAAAAUGCCAGGAACU   1   |||*||||||||||||||||| targets:3835   GAGGAAUUUUACGGUCCUUGA   3855 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090020F20, full insert sequence	NA	coding protein	psRNATarget
AK066407.1	ncRNA:21   CUCAUUAAAAUGCCAGGAACU   1   |||*|||||||||||=||||| targets:3813   GAGCAAUUUUACGGUUCUUGA   3833 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013063J08, full insert sequence	NA	coding protein	psRNATarget
AK288954.1	ncRNA:21   CUCAUUAAAAUGCCAGGAACU   1   |||*|||||||||||=||||| targets:3532   GAGCAAUUUUACGGUUCUUGA   3552 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090083O05, full insert sequence	NA	coding protein	psRNATarget
AK288182.1	ncRNA:21   CUCAUUAAAAUGCCAGGAACU   1   |||*||||||||*|||||||| targets:1288   GAGCAAUUUUACUGUCCUUGA   1308 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090005J12, full insert sequence	NA	coding protein	psRNATarget
AK318585.1	ncRNA:21   CUCAUUAAAAUGCCAGGAACU   1   ||||||*||*||||||||||| targets:70   GAGUAAAUUCACGGUCCUUGA   90 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100013F15, full insert sequence	NA	coding protein	psRNATarget
XM_015774311.1	ncRNA:21   CUCAUUAAAAUGCCAGGAACU   1   *||*|||||||||||*||||| targets:2714   UAGCAAUUUUACGGUACUUGA   2734 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333352 (LOC4333352), mRNA	uncharacterized LOC4333352(LOC4333352)	coding protein	psRNATarget
XM_015786027.1	ncRNA:21   CUCAUUAAAAUGCCAGGAACU   1   *||*||||*|||||||||||| targets:4597   AAGCAAUUCUACGGUCCUUGA   4617 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group ABC transporter C family member 8 (LOC9267441), mRNA	ABC transporter C family member 8(LOC9267441)	coding protein	psRNATarget