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BaseInfo

ncRNA ID novel_osa_miR1422
Species Oryza sativa
Class miRNA
Genome position Chr7:16123628-16123679 [+]
Reference genome IRGSP-1.0
Source SRR1743000
Length 24
Mature sequence(if miRNA) 29 - CCAUUGACUAGUGAGUCGGGGGCU - 52
Stem-loop(if miRNA) --    UA        CA     U  U
  CCUC  ACUCACUA  UCAAU GG U
  ||||  ||||||||  ||||| ||
  GGGG  UGAGUGAU  AGUUA CC C
UC    GC        -C     -  G
Stem-loop sequence CCUCUAACUCACUACAUCAAUUGGUUCGCCAUUGACUAGUGAGUCGGGGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK106950.1
ncRNA:24   UCGGGGGCUGAGUGAUCAGUUACC   1
  **|==|*|||||||*|||||||||
targets:2330   UUCUUCAGACUCACAAGUCAAUGG   2353

2.5 Oryza sativa Japonica Group cDNA clone:002-119-E03, full insert sequence NA coding protein psRNATarget