ncRNA ID | novel_osa_miR1414 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:9984269-9984368 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1742996;SRR1738214;SRR1738223;SRR1738223 |
Length | 24 |
Mature sequence(if miRNA) | 77 - CCCAGGCAAUUGUAUCGUCUACGU - 100 |
Stem-loop(if miRNA) |
--CCC      U          --  GUC    UC        CUACAUCAG      AGGCAA UGUAUCGUCU  AC   GGCA  GUUCAAGG         U      |||||| ||||||||||  ||   ||||  ||||||||      UCCGUU AUAUAGUAGG  UG   UCGU  UAGGUUCU         A AUCCA      U          UU  AUC    --        CCAGCUUAC |
Stem-loop sequence | CCCAGGCAAUUGUAUCGUCUACGUCGGCAUCGUUCAAGGCUACAUCAGUACAUUCGACCUCUUGGAUUGCUCUAGUUUGGAUGAUAUAUUUGCCUACCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288885.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090079K20, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK289121.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090097J21, full insert sequence | NA | coding protein | psRNATarget |